Protein–RNA interactions for Protein: O70481

Ubr1, E3 ubiquitin-protein ligase UBR1, mousemouse

Predictions only

Length 1,757 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr1O70481 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Ubr1O70481 Gm5112-201ENSMUST00000204407 2368 ntBASIC22.13■■□□□ 1.13
Ubr1O70481 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Ubr1O70481 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Ubr1O70481 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Ubr1O70481 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Ubr1O70481 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
Ubr1O70481 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC22.12■■□□□ 1.13
Ubr1O70481 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC22.12■■□□□ 1.13
Ubr1O70481 Gm27867-201ENSMUST00000184778 125 ntBASIC22.12■■□□□ 1.13
Ubr1O70481 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC22.12■■□□□ 1.13
Ubr1O70481 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Ubr1O70481 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
Ubr1O70481 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Ubr1O70481 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Ubr1O70481 Gm45203-201ENSMUST00000206384 1831 ntBASIC22.12■■□□□ 1.13
Ubr1O70481 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC22.12■■□□□ 1.13
Ubr1O70481 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Ubr1O70481 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC22.12■■□□□ 1.13
Ubr1O70481 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC22.12■■□□□ 1.13
Ubr1O70481 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC22.12■■□□□ 1.13
Ubr1O70481 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Ubr1O70481 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC22.11■■□□□ 1.13
Ubr1O70481 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Ubr1O70481 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Ubr1O70481 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC22.11■■□□□ 1.13
Ubr1O70481 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Ubr1O70481 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC22.11■■□□□ 1.13
Ubr1O70481 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC22.11■■□□□ 1.13
Ubr1O70481 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC22.11■■□□□ 1.13
Ubr1O70481 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Ubr1O70481 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Ubr1O70481 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Ubr1O70481 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC22.11■■□□□ 1.13
Ubr1O70481 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Ubr1O70481 Gm44430-201ENSMUST00000203376 995 ntBASIC22.1■■□□□ 1.13
Ubr1O70481 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC22.1■■□□□ 1.13
Ubr1O70481 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC22.1■■□□□ 1.13
Ubr1O70481 Rps4l-201ENSMUST00000071745 943 ntBASIC22.1■■□□□ 1.13
Ubr1O70481 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Ubr1O70481 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
Ubr1O70481 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
Ubr1O70481 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Ubr1O70481 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Ubr1O70481 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
Ubr1O70481 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Ubr1O70481 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Ubr1O70481 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC22.1■■□□□ 1.13
Ubr1O70481 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
Ubr1O70481 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Ubr1O70481 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC22.1■■□□□ 1.13
Ubr1O70481 CT009713.7-201ENSMUST00000224689 571 ntBASIC22.1■■□□□ 1.13
Ubr1O70481 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Ubr1O70481 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC22.1■■□□□ 1.13
Ubr1O70481 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
Ubr1O70481 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
Ubr1O70481 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Ubr1O70481 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Ubr1O70481 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
Ubr1O70481 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC22.09■■□□□ 1.13
Ubr1O70481 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Ubr1O70481 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Ubr1O70481 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Ubr1O70481 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC22.09■■□□□ 1.13
Ubr1O70481 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC22.09■■□□□ 1.13
Ubr1O70481 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Ubr1O70481 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC22.09■■□□□ 1.13
Ubr1O70481 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
Ubr1O70481 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
Ubr1O70481 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
Ubr1O70481 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
Ubr1O70481 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC22.08■■□□□ 1.13
Ubr1O70481 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC22.08■■□□□ 1.13
Ubr1O70481 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.12
Ubr1O70481 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC22.08■■□□□ 1.12
Ubr1O70481 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC22.08■■□□□ 1.12
Ubr1O70481 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.12
Ubr1O70481 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.12
Ubr1O70481 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Ubr1O70481 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC22.07■■□□□ 1.12
Ubr1O70481 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Ubr1O70481 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC22.07■■□□□ 1.12
Ubr1O70481 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC22.07■■□□□ 1.12
Ubr1O70481 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
Ubr1O70481 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
Ubr1O70481 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
Ubr1O70481 AC161829.1-201ENSMUST00000220298 281 ntBASIC22.07■■□□□ 1.12
Ubr1O70481 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Ubr1O70481 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Ubr1O70481 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Ubr1O70481 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
Ubr1O70481 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC22.06■■□□□ 1.12
Ubr1O70481 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
Ubr1O70481 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC22.06■■□□□ 1.12
Ubr1O70481 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC22.06■■□□□ 1.12
Ubr1O70481 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Ubr1O70481 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
Ubr1O70481 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
Ubr1O70481 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC22.06■■□□□ 1.12
Ubr1O70481 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC22.06■■□□□ 1.12
Retrieved 100 of 76,532 protein–RNA pairs in 21.3 ms