Protein–RNA interactions for Protein: O55038

Cxcl13, C-X-C motif chemokine 13, mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl13O55038 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cxcl13O55038 Gm42939-201ENSMUST00000197514 2205 ntBASIC14.45□□□□□ -0.1
Cxcl13O55038 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cxcl13O55038 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cxcl13O55038 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Cxcl13O55038 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cxcl13O55038 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Cxcl13O55038 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Cxcl13O55038 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cxcl13O55038 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cxcl13O55038 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cxcl13O55038 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cxcl13O55038 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Cxcl13O55038 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cxcl13O55038 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Cxcl13O55038 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC14.44□□□□□ -0.1
Cxcl13O55038 Gm37722-201ENSMUST00000193757 208 ntBASIC14.44□□□□□ -0.1
Cxcl13O55038 AC122351.1-201ENSMUST00000220467 126 ntBASIC14.44□□□□□ -0.1
Cxcl13O55038 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cxcl13O55038 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
Cxcl13O55038 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cxcl13O55038 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Cxcl13O55038 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cxcl13O55038 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Cxcl13O55038 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cxcl13O55038 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Cxcl13O55038 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cxcl13O55038 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cxcl13O55038 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cxcl13O55038 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cxcl13O55038 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Cxcl13O55038 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Cxcl13O55038 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC14.43□□□□□ -0.1
Cxcl13O55038 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Cxcl13O55038 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cxcl13O55038 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Cxcl13O55038 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cxcl13O55038 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cxcl13O55038 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cxcl13O55038 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Cxcl13O55038 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cxcl13O55038 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cxcl13O55038 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cxcl13O55038 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC14.42□□□□□ -0.1
Cxcl13O55038 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC14.42□□□□□ -0.1
Cxcl13O55038 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC14.42□□□□□ -0.1
Cxcl13O55038 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC14.42□□□□□ -0.1
Cxcl13O55038 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cxcl13O55038 Gm11950-201ENSMUST00000121615 838 ntBASIC14.42□□□□□ -0.1
Cxcl13O55038 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC14.42□□□□□ -0.1
Cxcl13O55038 Gm27704-201ENSMUST00000185094 107 ntBASIC14.42□□□□□ -0.1
Cxcl13O55038 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Cxcl13O55038 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cxcl13O55038 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cxcl13O55038 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cxcl13O55038 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Cxcl13O55038 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cxcl13O55038 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cxcl13O55038 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cxcl13O55038 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC14.41□□□□□ -0.1
Cxcl13O55038 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cxcl13O55038 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Cxcl13O55038 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Cxcl13O55038 Gm11860-201ENSMUST00000122346 1010 ntBASIC14.41□□□□□ -0.1
Cxcl13O55038 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cxcl13O55038 Gm6623-201ENSMUST00000173570 544 ntBASIC14.41□□□□□ -0.1
Cxcl13O55038 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC14.41□□□□□ -0.1
Cxcl13O55038 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC14.41□□□□□ -0.1
Cxcl13O55038 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC14.41□□□□□ -0.1
Cxcl13O55038 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC14.41□□□□□ -0.1
Cxcl13O55038 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cxcl13O55038 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cxcl13O55038 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cxcl13O55038 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Cxcl13O55038 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Cxcl13O55038 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Cxcl13O55038 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Cxcl13O55038 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Cxcl13O55038 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cxcl13O55038 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Cxcl13O55038 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC14.4□□□□□ -0.1
Cxcl13O55038 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cxcl13O55038 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC14.4□□□□□ -0.1
Cxcl13O55038 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cxcl13O55038 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC14.4□□□□□ -0.1
Cxcl13O55038 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Cxcl13O55038 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC14.4□□□□□ -0.1
Cxcl13O55038 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cxcl13O55038 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cxcl13O55038 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cxcl13O55038 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cxcl13O55038 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
Cxcl13O55038 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Cxcl13O55038 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cxcl13O55038 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Cxcl13O55038 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC14.4□□□□□ -0.1
Cxcl13O55038 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Cxcl13O55038 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cxcl13O55038 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Cxcl13O55038 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 21.9 ms