Protein–RNA interactions for Protein: O54990

Prom1, Prominin-1, mousemouse

Predictions only

Length 867 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prom1O54990 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Prom1O54990 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC18.8■□□□□ 0.6
Prom1O54990 Mzt1-203ENSMUST00000227948 952 ntBASIC18.8■□□□□ 0.6
Prom1O54990 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Prom1O54990 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Prom1O54990 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Prom1O54990 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Prom1O54990 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Prom1O54990 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Prom1O54990 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Prom1O54990 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Prom1O54990 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Prom1O54990 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Prom1O54990 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Prom1O54990 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC18.79■□□□□ 0.6
Prom1O54990 Ighv6-1-201ENSMUST00000193612 343 ntBASIC18.79■□□□□ 0.6
Prom1O54990 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Prom1O54990 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Prom1O54990 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Prom1O54990 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Prom1O54990 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Prom1O54990 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
Prom1O54990 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Prom1O54990 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Prom1O54990 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC18.79■□□□□ 0.6
Prom1O54990 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Prom1O54990 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC18.78■□□□□ 0.6
Prom1O54990 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC18.78■□□□□ 0.6
Prom1O54990 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Prom1O54990 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC18.78■□□□□ 0.6
Prom1O54990 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC18.78■□□□□ 0.6
Prom1O54990 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC18.78■□□□□ 0.6
Prom1O54990 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC18.78■□□□□ 0.6
Prom1O54990 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC18.78■□□□□ 0.6
Prom1O54990 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC18.78■□□□□ 0.6
Prom1O54990 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC18.78■□□□□ 0.6
Prom1O54990 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC18.78■□□□□ 0.6
Prom1O54990 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC18.78■□□□□ 0.6
Prom1O54990 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Prom1O54990 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Prom1O54990 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Prom1O54990 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Prom1O54990 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC18.78■□□□□ 0.6
Prom1O54990 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC18.78■□□□□ 0.6
Prom1O54990 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC18.78■□□□□ 0.6
Prom1O54990 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Prom1O54990 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Prom1O54990 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Prom1O54990 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Prom1O54990 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Prom1O54990 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Prom1O54990 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Prom1O54990 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Prom1O54990 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Prom1O54990 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
Prom1O54990 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC18.77■□□□□ 0.6
Prom1O54990 Birc2-201ENSMUST00000054878 378 ntBASIC18.77■□□□□ 0.6
Prom1O54990 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Prom1O54990 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Prom1O54990 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Prom1O54990 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Prom1O54990 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Prom1O54990 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.59
Prom1O54990 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Prom1O54990 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Prom1O54990 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Prom1O54990 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Prom1O54990 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC18.76■□□□□ 0.59
Prom1O54990 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC18.76■□□□□ 0.59
Prom1O54990 Gm5864-201ENSMUST00000202263 970 ntBASIC18.76■□□□□ 0.59
Prom1O54990 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Prom1O54990 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Prom1O54990 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Prom1O54990 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
Prom1O54990 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Prom1O54990 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Prom1O54990 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Prom1O54990 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Prom1O54990 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Prom1O54990 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Prom1O54990 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Prom1O54990 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Prom1O54990 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
Prom1O54990 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Prom1O54990 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Prom1O54990 Gm12895-201ENSMUST00000122214 226 ntBASIC18.75■□□□□ 0.59
Prom1O54990 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC18.75■□□□□ 0.59
Prom1O54990 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC18.75■□□□□ 0.59
Prom1O54990 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC18.75■□□□□ 0.59
Prom1O54990 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC18.75■□□□□ 0.59
Prom1O54990 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Prom1O54990 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
Prom1O54990 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Prom1O54990 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
Prom1O54990 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Prom1O54990 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Prom1O54990 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
Prom1O54990 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Prom1O54990 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Prom1O54990 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 24.2 ms