Protein–RNA interactions for Protein: O54907

Tnfsf12, Tumor necrosis factor ligand superfamily member 12, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfsf12O54907 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Tnfsf12O54907 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Tnfsf12O54907 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Tnfsf12O54907 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Tnfsf12O54907 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Tnfsf12O54907 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Tnfsf12O54907 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Tnfsf12O54907 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC14.04□□□□□ -0.16
Tnfsf12O54907 Gm43183-201ENSMUST00000200632 547 ntBASIC14.04□□□□□ -0.16
Tnfsf12O54907 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC14.04□□□□□ -0.16
Tnfsf12O54907 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Tnfsf12O54907 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Tnfsf12O54907 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Tnfsf12O54907 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC14.04□□□□□ -0.16
Tnfsf12O54907 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC14.04□□□□□ -0.16
Tnfsf12O54907 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Tnfsf12O54907 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Tnfsf12O54907 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Tnfsf12O54907 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Tnfsf12O54907 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Tnfsf12O54907 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Tnfsf12O54907 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Tnfsf12O54907 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Tnfsf12O54907 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Tnfsf12O54907 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Tnfsf12O54907 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC14.03□□□□□ -0.16
Tnfsf12O54907 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Tnfsf12O54907 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Tnfsf12O54907 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Tnfsf12O54907 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Tnfsf12O54907 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Tnfsf12O54907 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC14.03□□□□□ -0.16
Tnfsf12O54907 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Tnfsf12O54907 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Tnfsf12O54907 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Tnfsf12O54907 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Tnfsf12O54907 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC14.03□□□□□ -0.16
Tnfsf12O54907 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC14.03□□□□□ -0.16
Tnfsf12O54907 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Tnfsf12O54907 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC14.03□□□□□ -0.16
Tnfsf12O54907 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Tnfsf12O54907 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Tnfsf12O54907 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC14.03□□□□□ -0.16
Tnfsf12O54907 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Tnfsf12O54907 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Tnfsf12O54907 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Tnfsf12O54907 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Tnfsf12O54907 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
Tnfsf12O54907 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC14.02□□□□□ -0.16
Tnfsf12O54907 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Tnfsf12O54907 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC14.02□□□□□ -0.16
Tnfsf12O54907 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
Tnfsf12O54907 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Tnfsf12O54907 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Tnfsf12O54907 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Tnfsf12O54907 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Tnfsf12O54907 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Tnfsf12O54907 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Tnfsf12O54907 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Tnfsf12O54907 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Tnfsf12O54907 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
Tnfsf12O54907 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC14.02□□□□□ -0.17
Tnfsf12O54907 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
Tnfsf12O54907 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
Tnfsf12O54907 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Tnfsf12O54907 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Tnfsf12O54907 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
Tnfsf12O54907 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Tnfsf12O54907 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Tnfsf12O54907 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Tnfsf12O54907 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Tnfsf12O54907 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Tnfsf12O54907 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Tnfsf12O54907 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC14.01□□□□□ -0.17
Tnfsf12O54907 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Tnfsf12O54907 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Tnfsf12O54907 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Tnfsf12O54907 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Tnfsf12O54907 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Tnfsf12O54907 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Tnfsf12O54907 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Tnfsf12O54907 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Tnfsf12O54907 Gm16499-203ENSMUST00000204633 2177 ntBASIC14.01□□□□□ -0.17
Tnfsf12O54907 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC14.01□□□□□ -0.17
Tnfsf12O54907 Gm13168-201ENSMUST00000121771 632 ntBASIC14.01□□□□□ -0.17
Tnfsf12O54907 Gm20760-201ENSMUST00000179197 648 ntBASIC14.01□□□□□ -0.17
Tnfsf12O54907 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Tnfsf12O54907 Gm10698-201ENSMUST00000182663 604 ntBASIC14.01□□□□□ -0.17
Tnfsf12O54907 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Tnfsf12O54907 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Tnfsf12O54907 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Tnfsf12O54907 Gm26917-202ENSMUST00000192833 3329 ntBASIC14.01□□□□□ -0.17
Tnfsf12O54907 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC14.01□□□□□ -0.17
Tnfsf12O54907 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Tnfsf12O54907 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Tnfsf12O54907 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Tnfsf12O54907 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Tnfsf12O54907 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Tnfsf12O54907 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC14□□□□□ -0.17
Tnfsf12O54907 Gm15378-201ENSMUST00000121894 207 ntBASIC14□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 23.4 ms