Protein–RNA interactions for Protein: O54689

Ccr6, C-C chemokine receptor type 6, mousemouse

Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccr6O54689 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ccr6O54689 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ccr6O54689 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ccr6O54689 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ccr6O54689 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ccr6O54689 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ccr6O54689 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ccr6O54689 AC153526.5-201ENSMUST00000218661 2147 ntBASIC14.36□□□□□ -0.11
Ccr6O54689 Gm43072-201ENSMUST00000200283 1671 ntBASIC14.36□□□□□ -0.11
Ccr6O54689 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Ccr6O54689 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC14.36□□□□□ -0.11
Ccr6O54689 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ccr6O54689 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ccr6O54689 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ccr6O54689 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ccr6O54689 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ccr6O54689 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC14.36□□□□□ -0.11
Ccr6O54689 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC14.36□□□□□ -0.11
Ccr6O54689 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC14.36□□□□□ -0.11
Ccr6O54689 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ccr6O54689 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ccr6O54689 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
Ccr6O54689 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ccr6O54689 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC14.36□□□□□ -0.11
Ccr6O54689 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Ccr6O54689 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ccr6O54689 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ccr6O54689 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC14.35□□□□□ -0.11
Ccr6O54689 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ccr6O54689 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ccr6O54689 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ccr6O54689 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Ccr6O54689 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ccr6O54689 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
Ccr6O54689 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ccr6O54689 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ccr6O54689 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ccr6O54689 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ccr6O54689 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ccr6O54689 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Ccr6O54689 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ccr6O54689 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC14.34□□□□□ -0.11
Ccr6O54689 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ccr6O54689 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Ccr6O54689 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC14.34□□□□□ -0.11
Ccr6O54689 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Ccr6O54689 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ccr6O54689 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ccr6O54689 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ccr6O54689 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ccr6O54689 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ccr6O54689 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ccr6O54689 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ccr6O54689 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ccr6O54689 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ccr6O54689 Gm13401-201ENSMUST00000117074 291 ntBASIC14.34□□□□□ -0.11
Ccr6O54689 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC14.34□□□□□ -0.11
Ccr6O54689 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ccr6O54689 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ccr6O54689 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Ccr6O54689 Gm9988-201ENSMUST00000069786 435 ntBASIC14.34□□□□□ -0.11
Ccr6O54689 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ccr6O54689 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ccr6O54689 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC14.34□□□□□ -0.11
Ccr6O54689 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ccr6O54689 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC14.34□□□□□ -0.11
Ccr6O54689 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ccr6O54689 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Ccr6O54689 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ccr6O54689 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ccr6O54689 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ccr6O54689 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Ccr6O54689 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC14.33□□□□□ -0.11
Ccr6O54689 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Ccr6O54689 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
Ccr6O54689 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Ccr6O54689 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC14.33□□□□□ -0.12
Ccr6O54689 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ccr6O54689 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ccr6O54689 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ccr6O54689 AC093043.3-201ENSMUST00000226531 2273 ntBASIC14.33□□□□□ -0.12
Ccr6O54689 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Ccr6O54689 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC14.33□□□□□ -0.12
Ccr6O54689 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Ccr6O54689 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Ccr6O54689 Cdc34b-202ENSMUST00000188741 1252 ntBASIC14.33□□□□□ -0.12
Ccr6O54689 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ccr6O54689 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Ccr6O54689 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Ccr6O54689 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Ccr6O54689 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Ccr6O54689 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ccr6O54689 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC14.33□□□□□ -0.12
Ccr6O54689 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ccr6O54689 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ccr6O54689 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ccr6O54689 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Ccr6O54689 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ccr6O54689 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC14.32□□□□□ -0.12
Ccr6O54689 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 26.8 ms