Protein–RNA interactions for Protein: O35900

Lsm2, U6 snRNA-associated Sm-like protein LSm2, mousemouse

Known RBP Predictions only

Length 95 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm2O35900 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Lsm2O35900 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Lsm2O35900 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Lsm2O35900 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Lsm2O35900 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Lsm2O35900 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Lsm2O35900 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC15.22■□□□□ 0.03
Lsm2O35900 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Lsm2O35900 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC15.22■□□□□ 0.03
Lsm2O35900 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Lsm2O35900 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Lsm2O35900 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Lsm2O35900 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Lsm2O35900 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Lsm2O35900 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Lsm2O35900 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC15.22■□□□□ 0.03
Lsm2O35900 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Lsm2O35900 Gm7291-201ENSMUST00000199147 382 ntBASIC15.22■□□□□ 0.03
Lsm2O35900 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC15.22■□□□□ 0.03
Lsm2O35900 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Lsm2O35900 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Lsm2O35900 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Lsm2O35900 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Lsm2O35900 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Lsm2O35900 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Lsm2O35900 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Lsm2O35900 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Lsm2O35900 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Lsm2O35900 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Lsm2O35900 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Lsm2O35900 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Lsm2O35900 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
Lsm2O35900 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Lsm2O35900 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
Lsm2O35900 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC15.21■□□□□ 0.03
Lsm2O35900 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Lsm2O35900 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Lsm2O35900 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Lsm2O35900 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Lsm2O35900 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Lsm2O35900 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Lsm2O35900 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Lsm2O35900 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Lsm2O35900 Gm11643-201ENSMUST00000119578 864 ntBASIC15.21■□□□□ 0.03
Lsm2O35900 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC15.21■□□□□ 0.03
Lsm2O35900 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC15.21■□□□□ 0.03
Lsm2O35900 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Lsm2O35900 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Lsm2O35900 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Lsm2O35900 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Lsm2O35900 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Lsm2O35900 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Lsm2O35900 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
Lsm2O35900 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Lsm2O35900 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Lsm2O35900 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC15.2■□□□□ 0.02
Lsm2O35900 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Lsm2O35900 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Lsm2O35900 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Lsm2O35900 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Lsm2O35900 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Lsm2O35900 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Lsm2O35900 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Lsm2O35900 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Lsm2O35900 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Lsm2O35900 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Lsm2O35900 Gm10654-201ENSMUST00000098653 1633 ntBASIC15.2■□□□□ 0.02
Lsm2O35900 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Lsm2O35900 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC15.2■□□□□ 0.02
Lsm2O35900 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC15.2■□□□□ 0.02
Lsm2O35900 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Lsm2O35900 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC15.19■□□□□ 0.02
Lsm2O35900 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Lsm2O35900 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Lsm2O35900 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC15.19■□□□□ 0.02
Lsm2O35900 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Lsm2O35900 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Lsm2O35900 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Lsm2O35900 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
Lsm2O35900 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Lsm2O35900 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Lsm2O35900 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Lsm2O35900 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Lsm2O35900 Gm44549-201ENSMUST00000208351 577 ntBASIC15.19■□□□□ 0.02
Lsm2O35900 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Lsm2O35900 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Lsm2O35900 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Lsm2O35900 Flg-201ENSMUST00000050758 1488 ntBASIC15.19■□□□□ 0.02
Lsm2O35900 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Lsm2O35900 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Lsm2O35900 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Lsm2O35900 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Lsm2O35900 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Lsm2O35900 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Lsm2O35900 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
Lsm2O35900 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC15.18■□□□□ 0.02
Lsm2O35900 Gm10033-202ENSMUST00000211874 928 ntBASIC15.18■□□□□ 0.02
Lsm2O35900 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC15.18■□□□□ 0.02
Lsm2O35900 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Lsm2O35900 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 19.7 ms