Protein–RNA interactions for Protein: O35874

Slc1a4, Neutral amino acid transporter A, mousemouse

Predictions only

Length 532 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc1a4O35874 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Slc1a4O35874 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Slc1a4O35874 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Slc1a4O35874 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Slc1a4O35874 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
Slc1a4O35874 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Slc1a4O35874 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
Slc1a4O35874 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Slc1a4O35874 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Slc1a4O35874 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Slc1a4O35874 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Slc1a4O35874 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Slc1a4O35874 Gm18958-201ENSMUST00000174258 762 ntBASIC20.02■□□□□ 0.8
Slc1a4O35874 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC20.02■□□□□ 0.8
Slc1a4O35874 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
Slc1a4O35874 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Slc1a4O35874 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Slc1a4O35874 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
Slc1a4O35874 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Slc1a4O35874 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.79
Slc1a4O35874 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Slc1a4O35874 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Slc1a4O35874 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.79
Slc1a4O35874 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Slc1a4O35874 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Slc1a4O35874 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
Slc1a4O35874 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
Slc1a4O35874 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Slc1a4O35874 Gm10013-201ENSMUST00000106074 672 ntBASIC20.01■□□□□ 0.79
Slc1a4O35874 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Slc1a4O35874 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC20.01■□□□□ 0.79
Slc1a4O35874 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Slc1a4O35874 Gm22697-201ENSMUST00000175194 63 ntBASIC20.01■□□□□ 0.79
Slc1a4O35874 Gm18101-201ENSMUST00000215769 548 ntBASIC20.01■□□□□ 0.79
Slc1a4O35874 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Slc1a4O35874 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
Slc1a4O35874 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Slc1a4O35874 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Slc1a4O35874 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Slc1a4O35874 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Slc1a4O35874 Gm15635-204ENSMUST00000208024 2539 ntBASIC20.01■□□□□ 0.79
Slc1a4O35874 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Slc1a4O35874 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Slc1a4O35874 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC20■□□□□ 0.79
Slc1a4O35874 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Slc1a4O35874 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
Slc1a4O35874 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC20■□□□□ 0.79
Slc1a4O35874 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Slc1a4O35874 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
Slc1a4O35874 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC20■□□□□ 0.79
Slc1a4O35874 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC20■□□□□ 0.79
Slc1a4O35874 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
Slc1a4O35874 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
Slc1a4O35874 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Slc1a4O35874 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Slc1a4O35874 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
Slc1a4O35874 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC20■□□□□ 0.79
Slc1a4O35874 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Slc1a4O35874 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC20■□□□□ 0.79
Slc1a4O35874 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Slc1a4O35874 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Slc1a4O35874 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
Slc1a4O35874 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
Slc1a4O35874 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Slc1a4O35874 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Slc1a4O35874 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC19.99■□□□□ 0.79
Slc1a4O35874 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
Slc1a4O35874 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Slc1a4O35874 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Slc1a4O35874 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC19.99■□□□□ 0.79
Slc1a4O35874 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Slc1a4O35874 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Slc1a4O35874 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Slc1a4O35874 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Slc1a4O35874 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
Slc1a4O35874 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Slc1a4O35874 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Slc1a4O35874 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Slc1a4O35874 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Slc1a4O35874 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
Slc1a4O35874 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Slc1a4O35874 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Slc1a4O35874 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
Slc1a4O35874 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Slc1a4O35874 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
Slc1a4O35874 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
Slc1a4O35874 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC19.98■□□□□ 0.79
Slc1a4O35874 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Slc1a4O35874 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC19.98■□□□□ 0.79
Slc1a4O35874 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Slc1a4O35874 Gm7213-201ENSMUST00000215977 950 ntBASIC19.98■□□□□ 0.79
Slc1a4O35874 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
Slc1a4O35874 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Slc1a4O35874 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Slc1a4O35874 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Slc1a4O35874 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Slc1a4O35874 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Slc1a4O35874 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Slc1a4O35874 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Slc1a4O35874 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 61.8 ms