Protein–RNA interactions for Protein: O35526

Stx1a, Syntaxin-1A, mousemouse

Predictions only

Length 288 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Stx1aO35526 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Stx1aO35526 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Stx1aO35526 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Stx1aO35526 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Stx1aO35526 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC19.2■□□□□ 0.66
Stx1aO35526 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Stx1aO35526 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC19.2■□□□□ 0.66
Stx1aO35526 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Stx1aO35526 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Stx1aO35526 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Stx1aO35526 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Stx1aO35526 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Stx1aO35526 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Stx1aO35526 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Stx1aO35526 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Stx1aO35526 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
Stx1aO35526 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Stx1aO35526 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Stx1aO35526 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
Stx1aO35526 Gm15375-201ENSMUST00000119510 849 ntBASIC19.19■□□□□ 0.66
Stx1aO35526 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Stx1aO35526 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Stx1aO35526 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Stx1aO35526 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC19.19■□□□□ 0.66
Stx1aO35526 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Stx1aO35526 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Stx1aO35526 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Stx1aO35526 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Stx1aO35526 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Stx1aO35526 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
Stx1aO35526 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Stx1aO35526 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Stx1aO35526 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Stx1aO35526 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Stx1aO35526 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
Stx1aO35526 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Stx1aO35526 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Stx1aO35526 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Stx1aO35526 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Stx1aO35526 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
Stx1aO35526 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC19.18■□□□□ 0.66
Stx1aO35526 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Stx1aO35526 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
Stx1aO35526 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
Stx1aO35526 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
Stx1aO35526 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Stx1aO35526 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Stx1aO35526 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Stx1aO35526 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Stx1aO35526 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Stx1aO35526 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Stx1aO35526 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Stx1aO35526 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Stx1aO35526 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
Stx1aO35526 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC19.17■□□□□ 0.66
Stx1aO35526 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Stx1aO35526 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Stx1aO35526 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Stx1aO35526 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
Stx1aO35526 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Stx1aO35526 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC19.17■□□□□ 0.66
Stx1aO35526 Gm42569-201ENSMUST00000200539 472 ntBASIC19.17■□□□□ 0.66
Stx1aO35526 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Stx1aO35526 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Stx1aO35526 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Stx1aO35526 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC19.17■□□□□ 0.66
Stx1aO35526 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
Stx1aO35526 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Stx1aO35526 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC19.17■□□□□ 0.66
Stx1aO35526 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Stx1aO35526 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Stx1aO35526 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Stx1aO35526 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Stx1aO35526 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC19.17■□□□□ 0.66
Stx1aO35526 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC19.17■□□□□ 0.66
Stx1aO35526 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC19.17■□□□□ 0.66
Stx1aO35526 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Stx1aO35526 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Stx1aO35526 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Stx1aO35526 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Stx1aO35526 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC19.16■□□□□ 0.66
Stx1aO35526 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Stx1aO35526 Mir5133-201ENSMUST00000174955 77 ntBASIC19.16■□□□□ 0.66
Stx1aO35526 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Stx1aO35526 Gm4968-201ENSMUST00000071458 858 ntBASIC19.16■□□□□ 0.66
Stx1aO35526 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
Stx1aO35526 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Stx1aO35526 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Stx1aO35526 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Stx1aO35526 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC19.16■□□□□ 0.66
Stx1aO35526 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Stx1aO35526 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Stx1aO35526 Gm45560-201ENSMUST00000211492 1472 ntBASIC19.16■□□□□ 0.66
Stx1aO35526 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
Stx1aO35526 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Stx1aO35526 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Stx1aO35526 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Stx1aO35526 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Stx1aO35526 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Stx1aO35526 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 22.2 ms