Protein–RNA interactions for Protein: O35454

Clcn6, Chloride transport protein 6, mousemouse

Predictions only

Length 870 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn6O35454 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Clcn6O35454 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Clcn6O35454 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
Clcn6O35454 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Clcn6O35454 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
Clcn6O35454 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Clcn6O35454 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Clcn6O35454 Gm11637-201ENSMUST00000120601 592 ntBASIC18.18■□□□□ 0.5
Clcn6O35454 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC18.18■□□□□ 0.5
Clcn6O35454 Gm43550-201ENSMUST00000200597 303 ntBASIC18.18■□□□□ 0.5
Clcn6O35454 AC112142.1-201ENSMUST00000228796 918 ntBASIC18.18■□□□□ 0.5
Clcn6O35454 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC18.18■□□□□ 0.5
Clcn6O35454 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
Clcn6O35454 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
Clcn6O35454 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Clcn6O35454 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Clcn6O35454 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Clcn6O35454 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Clcn6O35454 Gm7290-201ENSMUST00000104990 617 ntBASIC18.17■□□□□ 0.5
Clcn6O35454 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC18.17■□□□□ 0.5
Clcn6O35454 Gm13148-201ENSMUST00000118892 745 ntBASIC18.17■□□□□ 0.5
Clcn6O35454 Gm12918-201ENSMUST00000120234 636 ntBASIC18.17■□□□□ 0.5
Clcn6O35454 Gm15710-201ENSMUST00000121821 636 ntBASIC18.17■□□□□ 0.5
Clcn6O35454 Gm5075-201ENSMUST00000196916 622 ntBASIC18.17■□□□□ 0.5
Clcn6O35454 AC173482.2-201ENSMUST00000224044 750 ntBASIC18.17■□□□□ 0.5
Clcn6O35454 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Clcn6O35454 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC18.17■□□□□ 0.5
Clcn6O35454 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC18.17■□□□□ 0.5
Clcn6O35454 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Clcn6O35454 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
Clcn6O35454 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Clcn6O35454 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
Clcn6O35454 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Clcn6O35454 Gm4593-201ENSMUST00000205334 1555 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Clcn6O35454 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Clcn6O35454 Gm42736-201ENSMUST00000200723 1353 ntBASIC18.17■□□□□ 0.5
Clcn6O35454 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
Clcn6O35454 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Clcn6O35454 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Clcn6O35454 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Clcn6O35454 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
Clcn6O35454 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Clcn6O35454 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC18.16■□□□□ 0.5
Clcn6O35454 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Clcn6O35454 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Clcn6O35454 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Clcn6O35454 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Clcn6O35454 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC18.16■□□□□ 0.5
Clcn6O35454 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Clcn6O35454 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Clcn6O35454 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
Clcn6O35454 Il15ra-205ENSMUST00000114833 1607 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Clcn6O35454 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC18.16■□□□□ 0.5
Clcn6O35454 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Clcn6O35454 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC18.15■□□□□ 0.5
Clcn6O35454 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Clcn6O35454 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Clcn6O35454 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC18.15■□□□□ 0.5
Clcn6O35454 Tceal9-202ENSMUST00000113115 888 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
Clcn6O35454 Peak1os-201ENSMUST00000181444 1264 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Clcn6O35454 Gm29747-201ENSMUST00000194764 585 ntBASIC18.15■□□□□ 0.5
Clcn6O35454 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
Clcn6O35454 Speer4c-201ENSMUST00000095005 1159 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Clcn6O35454 Speer4d-201ENSMUST00000095006 1194 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Clcn6O35454 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Clcn6O35454 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC18.15■□□□□ 0.5
Clcn6O35454 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC18.15■□□□□ 0.5
Clcn6O35454 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC18.15■□□□□ 0.5
Clcn6O35454 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Clcn6O35454 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Clcn6O35454 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.5
Clcn6O35454 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
Clcn6O35454 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Clcn6O35454 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Clcn6O35454 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Clcn6O35454 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Clcn6O35454 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Clcn6O35454 Gm37604-201ENSMUST00000191749 1272 ntBASIC18.14■□□□□ 0.49
Clcn6O35454 Gm6649-201ENSMUST00000199743 1165 ntBASIC18.14■□□□□ 0.49
Clcn6O35454 AC163038.1-201ENSMUST00000223632 1142 ntBASIC18.14■□□□□ 0.49
Clcn6O35454 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Clcn6O35454 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Clcn6O35454 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
Clcn6O35454 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Clcn6O35454 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Clcn6O35454 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Clcn6O35454 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
Clcn6O35454 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Clcn6O35454 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Clcn6O35454 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC18.14■□□□□ 0.49
Clcn6O35454 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Clcn6O35454 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Clcn6O35454 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Clcn6O35454 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC18.14■□□□□ 0.49
Clcn6O35454 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Clcn6O35454 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
Clcn6O35454 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Clcn6O35454 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Clcn6O35454 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
Clcn6O35454 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 45.2 ms