Protein–RNA interactions for Protein: O35393

Efnb3, Ephrin-B3, mousemouse

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Efnb3O35393 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC13.49□□□□□ -0.25
Efnb3O35393 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Efnb3O35393 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Efnb3O35393 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Efnb3O35393 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
Efnb3O35393 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Efnb3O35393 Zfp783-201ENSMUST00000095946 670 ntBASIC13.49□□□□□ -0.25
Efnb3O35393 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Efnb3O35393 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Efnb3O35393 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Efnb3O35393 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Efnb3O35393 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Efnb3O35393 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Efnb3O35393 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Efnb3O35393 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Efnb3O35393 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Efnb3O35393 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Efnb3O35393 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Efnb3O35393 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Efnb3O35393 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
Efnb3O35393 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC13.48□□□□□ -0.25
Efnb3O35393 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Efnb3O35393 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC13.48□□□□□ -0.25
Efnb3O35393 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Efnb3O35393 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Efnb3O35393 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
Efnb3O35393 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Efnb3O35393 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC13.48□□□□□ -0.25
Efnb3O35393 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Efnb3O35393 Gm2399-201ENSMUST00000104944 225 ntBASIC13.48□□□□□ -0.25
Efnb3O35393 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
Efnb3O35393 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Efnb3O35393 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC13.48□□□□□ -0.25
Efnb3O35393 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC13.48□□□□□ -0.25
Efnb3O35393 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC13.48□□□□□ -0.25
Efnb3O35393 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
Efnb3O35393 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Efnb3O35393 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Efnb3O35393 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Efnb3O35393 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Efnb3O35393 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Efnb3O35393 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC13.48□□□□□ -0.25
Efnb3O35393 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Efnb3O35393 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Efnb3O35393 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Efnb3O35393 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Efnb3O35393 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Efnb3O35393 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Efnb3O35393 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC13.48□□□□□ -0.25
Efnb3O35393 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Efnb3O35393 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Efnb3O35393 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Efnb3O35393 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Efnb3O35393 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Efnb3O35393 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Efnb3O35393 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Efnb3O35393 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Efnb3O35393 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC13.47□□□□□ -0.25
Efnb3O35393 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Efnb3O35393 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC13.47□□□□□ -0.25
Efnb3O35393 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Efnb3O35393 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
Efnb3O35393 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Efnb3O35393 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Efnb3O35393 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Efnb3O35393 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
Efnb3O35393 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Efnb3O35393 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Efnb3O35393 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Efnb3O35393 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Efnb3O35393 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Efnb3O35393 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Efnb3O35393 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Efnb3O35393 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
Efnb3O35393 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Efnb3O35393 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Efnb3O35393 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Efnb3O35393 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Efnb3O35393 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Efnb3O35393 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Efnb3O35393 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Efnb3O35393 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Efnb3O35393 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC13.46□□□□□ -0.25
Efnb3O35393 Gm13401-201ENSMUST00000117074 291 ntBASIC13.46□□□□□ -0.25
Efnb3O35393 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC13.46□□□□□ -0.25
Efnb3O35393 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Efnb3O35393 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Efnb3O35393 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Efnb3O35393 Mir5133-201ENSMUST00000174955 77 ntBASIC13.46□□□□□ -0.25
Efnb3O35393 Gm6365-201ENSMUST00000054711 744 ntBASIC13.46□□□□□ -0.25
Efnb3O35393 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Efnb3O35393 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC13.46□□□□□ -0.25
Efnb3O35393 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Efnb3O35393 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Efnb3O35393 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Efnb3O35393 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC13.46□□□□□ -0.26
Efnb3O35393 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Efnb3O35393 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Efnb3O35393 Tfap2a-209ENSMUST00000225180 1828 ntBASIC13.46□□□□□ -0.26
Efnb3O35393 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 46.9 ms