Protein–RNA interactions for Protein: O35137

Alx4, Homeobox protein aristaless-like 4, mousemouse

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alx4O35137 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Alx4O35137 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Alx4O35137 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Alx4O35137 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Alx4O35137 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Alx4O35137 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Alx4O35137 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC15.22■□□□□ 0.03
Alx4O35137 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Alx4O35137 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Alx4O35137 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Alx4O35137 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Alx4O35137 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Alx4O35137 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Alx4O35137 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
Alx4O35137 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Alx4O35137 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Alx4O35137 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Alx4O35137 Gm45560-201ENSMUST00000211492 1472 ntBASIC15.21■□□□□ 0.03
Alx4O35137 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Alx4O35137 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Alx4O35137 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Alx4O35137 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Alx4O35137 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Alx4O35137 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
Alx4O35137 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Alx4O35137 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC15.21■□□□□ 0.03
Alx4O35137 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC15.21■□□□□ 0.03
Alx4O35137 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC15.21■□□□□ 0.03
Alx4O35137 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Alx4O35137 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
Alx4O35137 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Alx4O35137 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Alx4O35137 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Alx4O35137 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
Alx4O35137 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.02
Alx4O35137 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.02
Alx4O35137 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Alx4O35137 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Alx4O35137 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Alx4O35137 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Alx4O35137 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Alx4O35137 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Alx4O35137 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Alx4O35137 Gm37812-201ENSMUST00000195216 2475 ntBASIC15.2■□□□□ 0.02
Alx4O35137 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Alx4O35137 Dancr-204ENSMUST00000132389 2347 ntBASIC15.2■□□□□ 0.02
Alx4O35137 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Alx4O35137 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Alx4O35137 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Alx4O35137 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC15.2■□□□□ 0.02
Alx4O35137 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Alx4O35137 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC15.2■□□□□ 0.02
Alx4O35137 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Alx4O35137 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Alx4O35137 Mir5133-201ENSMUST00000174955 77 ntBASIC15.2■□□□□ 0.02
Alx4O35137 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC15.2■□□□□ 0.02
Alx4O35137 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Alx4O35137 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC15.2■□□□□ 0.02
Alx4O35137 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
Alx4O35137 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Alx4O35137 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Alx4O35137 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Alx4O35137 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Alx4O35137 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Alx4O35137 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Alx4O35137 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC15.2■□□□□ 0.02
Alx4O35137 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
Alx4O35137 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC15.2■□□□□ 0.02
Alx4O35137 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Alx4O35137 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Alx4O35137 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Alx4O35137 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Alx4O35137 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Alx4O35137 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Alx4O35137 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Alx4O35137 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Alx4O35137 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
Alx4O35137 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC15.19■□□□□ 0.02
Alx4O35137 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Alx4O35137 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Alx4O35137 Gm26571-201ENSMUST00000181399 666 ntBASIC15.19■□□□□ 0.02
Alx4O35137 Gm2559-201ENSMUST00000201323 363 ntBASIC15.19■□□□□ 0.02
Alx4O35137 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Alx4O35137 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Alx4O35137 Gm4968-201ENSMUST00000071458 858 ntBASIC15.19■□□□□ 0.02
Alx4O35137 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Alx4O35137 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Alx4O35137 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC15.19■□□□□ 0.02
Alx4O35137 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC15.19■□□□□ 0.02
Alx4O35137 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Alx4O35137 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Alx4O35137 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC15.19■□□□□ 0.02
Alx4O35137 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC15.19■□□□□ 0.02
Alx4O35137 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Alx4O35137 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
Alx4O35137 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Alx4O35137 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Alx4O35137 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Alx4O35137 Dio3-201ENSMUST00000097228 1449 ntBASIC15.18■□□□□ 0.02
Alx4O35137 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 41.6 ms