Protein–RNA interactions for Protein: O35126

Atn1, Atrophin-1, mousemouse

Predictions only

Length 1,175 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atn1O35126 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
Atn1O35126 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Atn1O35126 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Atn1O35126 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Atn1O35126 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Atn1O35126 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Atn1O35126 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Atn1O35126 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
Atn1O35126 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
Atn1O35126 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Atn1O35126 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC16.66■□□□□ 0.26
Atn1O35126 Gm20049-201ENSMUST00000219950 730 ntBASIC16.66■□□□□ 0.26
Atn1O35126 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Atn1O35126 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Atn1O35126 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
Atn1O35126 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
Atn1O35126 Hivep3-201ENSMUST00000084306 2973 ntBASIC16.66■□□□□ 0.26
Atn1O35126 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Atn1O35126 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Atn1O35126 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Atn1O35126 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Atn1O35126 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
Atn1O35126 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Atn1O35126 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Atn1O35126 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Atn1O35126 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Atn1O35126 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Atn1O35126 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
Atn1O35126 Gm13158-201ENSMUST00000122007 736 ntBASIC16.65■□□□□ 0.26
Atn1O35126 Gm37292-201ENSMUST00000192062 758 ntBASIC16.65■□□□□ 0.26
Atn1O35126 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC16.65■□□□□ 0.26
Atn1O35126 Slc35b2-207ENSMUST00000226086 850 ntBASIC16.65■□□□□ 0.26
Atn1O35126 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Atn1O35126 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
Atn1O35126 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Atn1O35126 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Atn1O35126 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Atn1O35126 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Atn1O35126 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Atn1O35126 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Atn1O35126 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
Atn1O35126 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Atn1O35126 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Atn1O35126 Gm28265-201ENSMUST00000188201 2319 ntBASIC16.64■□□□□ 0.25
Atn1O35126 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
Atn1O35126 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
Atn1O35126 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Atn1O35126 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Atn1O35126 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Atn1O35126 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Atn1O35126 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Atn1O35126 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Atn1O35126 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC16.64■□□□□ 0.25
Atn1O35126 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC16.64■□□□□ 0.25
Atn1O35126 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Atn1O35126 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Atn1O35126 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Atn1O35126 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
Atn1O35126 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
Atn1O35126 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Atn1O35126 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC16.64■□□□□ 0.25
Atn1O35126 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Atn1O35126 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Atn1O35126 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Atn1O35126 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Atn1O35126 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
Atn1O35126 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Atn1O35126 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Atn1O35126 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC16.63■□□□□ 0.25
Atn1O35126 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC16.63■□□□□ 0.25
Atn1O35126 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC16.63■□□□□ 0.25
Atn1O35126 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Atn1O35126 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Atn1O35126 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Atn1O35126 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Atn1O35126 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC16.63■□□□□ 0.25
Atn1O35126 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Atn1O35126 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Atn1O35126 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
Atn1O35126 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Atn1O35126 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Atn1O35126 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Atn1O35126 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Atn1O35126 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC16.62■□□□□ 0.25
Atn1O35126 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Atn1O35126 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Atn1O35126 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Atn1O35126 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Atn1O35126 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Atn1O35126 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Atn1O35126 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Atn1O35126 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Atn1O35126 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC16.62■□□□□ 0.25
Atn1O35126 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
Atn1O35126 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Atn1O35126 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC16.62■□□□□ 0.25
Atn1O35126 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Atn1O35126 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Atn1O35126 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Atn1O35126 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 33.8 ms