Protein–RNA interactions for Protein: O08791

Ebf3, Transcription factor COE3, mousemouse

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf3O08791 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ebf3O08791 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ebf3O08791 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ebf3O08791 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ebf3O08791 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ebf3O08791 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ebf3O08791 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ebf3O08791 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ebf3O08791 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ebf3O08791 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Ebf3O08791 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
Ebf3O08791 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ebf3O08791 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC17.68■□□□□ 0.42
Ebf3O08791 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC17.68■□□□□ 0.42
Ebf3O08791 Gm9013-201ENSMUST00000132939 882 ntBASIC17.68■□□□□ 0.42
Ebf3O08791 Gm27704-201ENSMUST00000185094 107 ntBASIC17.68■□□□□ 0.42
Ebf3O08791 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Ebf3O08791 AC120002.2-201ENSMUST00000220205 773 ntBASIC17.68■□□□□ 0.42
Ebf3O08791 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ebf3O08791 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ebf3O08791 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ebf3O08791 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ebf3O08791 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC17.68■□□□□ 0.42
Ebf3O08791 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ebf3O08791 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Ebf3O08791 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC17.68■□□□□ 0.42
Ebf3O08791 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ebf3O08791 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ebf3O08791 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Ebf3O08791 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
Ebf3O08791 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC17.67■□□□□ 0.42
Ebf3O08791 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
Ebf3O08791 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC17.67■□□□□ 0.42
Ebf3O08791 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Ebf3O08791 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC17.67■□□□□ 0.42
Ebf3O08791 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC17.67■□□□□ 0.42
Ebf3O08791 AC159205.3-201ENSMUST00000224614 874 ntBASIC17.67■□□□□ 0.42
Ebf3O08791 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ebf3O08791 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ebf3O08791 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Ebf3O08791 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ebf3O08791 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ebf3O08791 Gm37374-201ENSMUST00000194954 1829 ntBASIC17.67■□□□□ 0.42
Ebf3O08791 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ebf3O08791 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ebf3O08791 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ebf3O08791 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ebf3O08791 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
Ebf3O08791 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ebf3O08791 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Ebf3O08791 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ebf3O08791 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ebf3O08791 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ebf3O08791 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC17.66■□□□□ 0.42
Ebf3O08791 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Ebf3O08791 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ebf3O08791 Gm29518-201ENSMUST00000190858 372 ntBASIC17.66■□□□□ 0.42
Ebf3O08791 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Ebf3O08791 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Ebf3O08791 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC17.66■□□□□ 0.42
Ebf3O08791 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC17.66■□□□□ 0.42
Ebf3O08791 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ebf3O08791 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ebf3O08791 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC17.66■□□□□ 0.42
Ebf3O08791 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Ebf3O08791 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Ebf3O08791 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC17.66■□□□□ 0.42
Ebf3O08791 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ebf3O08791 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ebf3O08791 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ebf3O08791 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ebf3O08791 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ebf3O08791 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
Ebf3O08791 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ebf3O08791 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ebf3O08791 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Ebf3O08791 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ebf3O08791 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ebf3O08791 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
Ebf3O08791 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ebf3O08791 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Ebf3O08791 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Ebf3O08791 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ebf3O08791 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ebf3O08791 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ebf3O08791 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Ebf3O08791 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ebf3O08791 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ebf3O08791 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ebf3O08791 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ebf3O08791 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Ebf3O08791 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ebf3O08791 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.42
Ebf3O08791 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Ebf3O08791 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ebf3O08791 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
Ebf3O08791 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ebf3O08791 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ebf3O08791 Gm14464-201ENSMUST00000119658 1254 ntBASIC17.64■□□□□ 0.41
Ebf3O08791 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 14.2 ms