Protein–RNA interactions for Protein: O08759

Ube3a, Ubiquitin-protein ligase E3A, mousemouse

Predictions only

Length 870 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube3aO08759 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.54
Ube3aO08759 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
Ube3aO08759 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC18.46■□□□□ 0.54
Ube3aO08759 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Ube3aO08759 Gm11643-201ENSMUST00000119578 864 ntBASIC18.45■□□□□ 0.54
Ube3aO08759 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Ube3aO08759 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
Ube3aO08759 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Ube3aO08759 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Ube3aO08759 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Ube3aO08759 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Ube3aO08759 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Ube3aO08759 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Ube3aO08759 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
Ube3aO08759 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC18.44■□□□□ 0.54
Ube3aO08759 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC18.44■□□□□ 0.54
Ube3aO08759 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Ube3aO08759 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
Ube3aO08759 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Ube3aO08759 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Ube3aO08759 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Ube3aO08759 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC18.44■□□□□ 0.54
Ube3aO08759 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC18.44■□□□□ 0.54
Ube3aO08759 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
Ube3aO08759 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Ube3aO08759 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Ube3aO08759 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC18.44■□□□□ 0.54
Ube3aO08759 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
Ube3aO08759 AC112142.1-201ENSMUST00000228796 918 ntBASIC18.44■□□□□ 0.54
Ube3aO08759 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Ube3aO08759 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Ube3aO08759 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Ube3aO08759 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Ube3aO08759 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Ube3aO08759 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Ube3aO08759 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Ube3aO08759 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC18.44■□□□□ 0.54
Ube3aO08759 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC18.44■□□□□ 0.54
Ube3aO08759 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
Ube3aO08759 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Ube3aO08759 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Ube3aO08759 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Ube3aO08759 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC18.43■□□□□ 0.54
Ube3aO08759 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Ube3aO08759 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC18.43■□□□□ 0.54
Ube3aO08759 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Ube3aO08759 Gm27011-201ENSMUST00000182352 972 ntBASIC18.43■□□□□ 0.54
Ube3aO08759 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC18.43■□□□□ 0.54
Ube3aO08759 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Ube3aO08759 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Ube3aO08759 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Ube3aO08759 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Ube3aO08759 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Ube3aO08759 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
Ube3aO08759 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Ube3aO08759 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Ube3aO08759 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC18.43■□□□□ 0.54
Ube3aO08759 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
Ube3aO08759 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Ube3aO08759 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Ube3aO08759 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC18.43■□□□□ 0.54
Ube3aO08759 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Ube3aO08759 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC18.42■□□□□ 0.54
Ube3aO08759 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
Ube3aO08759 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Ube3aO08759 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Ube3aO08759 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Ube3aO08759 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC18.42■□□□□ 0.54
Ube3aO08759 Gm26917-202ENSMUST00000192833 3329 ntBASIC18.42■□□□□ 0.54
Ube3aO08759 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Ube3aO08759 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Ube3aO08759 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Ube3aO08759 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Ube3aO08759 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Ube3aO08759 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Ube3aO08759 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Ube3aO08759 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Ube3aO08759 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Ube3aO08759 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Ube3aO08759 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Ube3aO08759 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Ube3aO08759 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Ube3aO08759 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Ube3aO08759 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Ube3aO08759 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Ube3aO08759 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Ube3aO08759 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC18.41■□□□□ 0.54
Ube3aO08759 Gm11927-201ENSMUST00000118472 759 ntBASIC18.41■□□□□ 0.54
Ube3aO08759 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC18.41■□□□□ 0.54
Ube3aO08759 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
Ube3aO08759 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Ube3aO08759 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Ube3aO08759 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Ube3aO08759 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
Ube3aO08759 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Ube3aO08759 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Ube3aO08759 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Ube3aO08759 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Ube3aO08759 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Ube3aO08759 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 22.8 ms