Protein–RNA interactions for Protein: O08712

Tnfrsf11b, Tumor necrosis factor receptor superfamily member 11B, mousemouse

Predictions only

Length 401 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf11bO08712 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Tnfrsf11bO08712 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Tnfrsf11bO08712 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC17.33■□□□□ 0.37
Tnfrsf11bO08712 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
Tnfrsf11bO08712 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Tnfrsf11bO08712 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
Tnfrsf11bO08712 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC17.33■□□□□ 0.36
Tnfrsf11bO08712 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
Tnfrsf11bO08712 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Tnfrsf11bO08712 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC17.33■□□□□ 0.36
Tnfrsf11bO08712 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Tnfrsf11bO08712 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC17.33■□□□□ 0.36
Tnfrsf11bO08712 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Tnfrsf11bO08712 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Tnfrsf11bO08712 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC17.32■□□□□ 0.36
Tnfrsf11bO08712 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Tnfrsf11bO08712 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Tnfrsf11bO08712 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Tnfrsf11bO08712 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Tnfrsf11bO08712 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Tnfrsf11bO08712 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Tnfrsf11bO08712 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Tnfrsf11bO08712 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Tnfrsf11bO08712 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Tnfrsf11bO08712 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Tnfrsf11bO08712 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Tnfrsf11bO08712 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Tnfrsf11bO08712 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Tnfrsf11bO08712 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Tnfrsf11bO08712 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Tnfrsf11bO08712 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Tnfrsf11bO08712 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Tnfrsf11bO08712 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
Tnfrsf11bO08712 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Tnfrsf11bO08712 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Tnfrsf11bO08712 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Tnfrsf11bO08712 Gm15378-201ENSMUST00000121894 207 ntBASIC17.31■□□□□ 0.36
Tnfrsf11bO08712 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Tnfrsf11bO08712 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC17.31■□□□□ 0.36
Tnfrsf11bO08712 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Tnfrsf11bO08712 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Tnfrsf11bO08712 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Tnfrsf11bO08712 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Tnfrsf11bO08712 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Tnfrsf11bO08712 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Tnfrsf11bO08712 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Tnfrsf11bO08712 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Tnfrsf11bO08712 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Tnfrsf11bO08712 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Tnfrsf11bO08712 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Tnfrsf11bO08712 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Tnfrsf11bO08712 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Tnfrsf11bO08712 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Tnfrsf11bO08712 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
Tnfrsf11bO08712 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Tnfrsf11bO08712 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Tnfrsf11bO08712 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Tnfrsf11bO08712 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Tnfrsf11bO08712 Gm10698-201ENSMUST00000182663 604 ntBASIC17.3■□□□□ 0.36
Tnfrsf11bO08712 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Tnfrsf11bO08712 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Tnfrsf11bO08712 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Tnfrsf11bO08712 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
Tnfrsf11bO08712 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Tnfrsf11bO08712 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Tnfrsf11bO08712 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Tnfrsf11bO08712 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Tnfrsf11bO08712 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC17.3■□□□□ 0.36
Tnfrsf11bO08712 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Tnfrsf11bO08712 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC17.29■□□□□ 0.36
Tnfrsf11bO08712 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Tnfrsf11bO08712 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Tnfrsf11bO08712 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Tnfrsf11bO08712 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Tnfrsf11bO08712 Gm8839-201ENSMUST00000121279 1645 ntBASIC17.29■□□□□ 0.36
Tnfrsf11bO08712 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Tnfrsf11bO08712 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC17.29■□□□□ 0.36
Tnfrsf11bO08712 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Tnfrsf11bO08712 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Tnfrsf11bO08712 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC17.29■□□□□ 0.36
Tnfrsf11bO08712 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC17.29■□□□□ 0.36
Tnfrsf11bO08712 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC17.29■□□□□ 0.36
Tnfrsf11bO08712 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC17.29■□□□□ 0.36
Tnfrsf11bO08712 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Tnfrsf11bO08712 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Tnfrsf11bO08712 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC17.29■□□□□ 0.36
Tnfrsf11bO08712 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Tnfrsf11bO08712 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Tnfrsf11bO08712 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Tnfrsf11bO08712 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Tnfrsf11bO08712 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Tnfrsf11bO08712 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Tnfrsf11bO08712 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Tnfrsf11bO08712 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Tnfrsf11bO08712 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Tnfrsf11bO08712 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Tnfrsf11bO08712 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Tnfrsf11bO08712 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Tnfrsf11bO08712 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Tnfrsf11bO08712 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 47 ms