Protein–RNA interactions for Protein: O08603

Raet1b, Retinoic acid early-inducible protein 1-beta, mousemouse

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Raet1bO08603 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Raet1bO08603 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC15.12■□□□□ 0.01
Raet1bO08603 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Raet1bO08603 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Raet1bO08603 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Raet1bO08603 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Raet1bO08603 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Raet1bO08603 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Raet1bO08603 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
Raet1bO08603 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Raet1bO08603 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Raet1bO08603 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Raet1bO08603 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Raet1bO08603 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Raet1bO08603 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC15.11■□□□□ 0.01
Raet1bO08603 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Raet1bO08603 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Raet1bO08603 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC15.11■□□□□ 0.01
Raet1bO08603 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Raet1bO08603 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Raet1bO08603 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Raet1bO08603 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Raet1bO08603 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Raet1bO08603 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Raet1bO08603 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Raet1bO08603 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Raet1bO08603 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Raet1bO08603 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Raet1bO08603 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC15.1■□□□□ 0.01
Raet1bO08603 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Raet1bO08603 Gm7638-201ENSMUST00000121348 967 ntBASIC15.1■□□□□ 0.01
Raet1bO08603 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Raet1bO08603 Gm9731-201ENSMUST00000209480 747 ntBASIC15.1■□□□□ 0.01
Raet1bO08603 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC15.1■□□□□ 0.01
Raet1bO08603 Arhgef33-211ENSMUST00000225658 473 ntBASIC15.1■□□□□ 0.01
Raet1bO08603 AC156016.1-201ENSMUST00000227190 1035 ntBASIC15.1■□□□□ 0.01
Raet1bO08603 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Raet1bO08603 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
Raet1bO08603 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC15.1■□□□□ 0.01
Raet1bO08603 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Raet1bO08603 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC15.1■□□□□ 0.01
Raet1bO08603 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Raet1bO08603 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Raet1bO08603 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Raet1bO08603 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC15.1■□□□□ 0.01
Raet1bO08603 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Raet1bO08603 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC15.1■□□□□ 0.01
Raet1bO08603 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Raet1bO08603 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Raet1bO08603 AC154231.1-201ENSMUST00000220564 2175 ntBASIC15.09■□□□□ 0.01
Raet1bO08603 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Raet1bO08603 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Raet1bO08603 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Raet1bO08603 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Raet1bO08603 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Raet1bO08603 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
Raet1bO08603 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
Raet1bO08603 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Raet1bO08603 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC15.09■□□□□ 0.01
Raet1bO08603 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Raet1bO08603 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC15.09■□□□□ 0.01
Raet1bO08603 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC15.09■□□□□ 0.01
Raet1bO08603 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
Raet1bO08603 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Raet1bO08603 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Raet1bO08603 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Raet1bO08603 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Raet1bO08603 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Raet1bO08603 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Raet1bO08603 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Raet1bO08603 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Raet1bO08603 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Raet1bO08603 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC15.09■□□□□ 0.01
Raet1bO08603 Gm16401-202ENSMUST00000197463 2074 ntBASIC15.08■□□□□ 0.01
Raet1bO08603 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Raet1bO08603 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Raet1bO08603 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0.01
Raet1bO08603 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0.01
Raet1bO08603 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0.01
Raet1bO08603 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
Raet1bO08603 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC15.08■□□□□ 0
Raet1bO08603 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Raet1bO08603 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC15.08■□□□□ 0
Raet1bO08603 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC15.08■□□□□ 0
Raet1bO08603 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC15.08■□□□□ 0
Raet1bO08603 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC15.08■□□□□ 0
Raet1bO08603 Otx2os1-204ENSMUST00000227221 751 ntBASIC15.08■□□□□ 0
Raet1bO08603 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
Raet1bO08603 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Raet1bO08603 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Raet1bO08603 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC15.08■□□□□ 0
Raet1bO08603 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Raet1bO08603 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Raet1bO08603 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC15.08■□□□□ 0
Raet1bO08603 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Raet1bO08603 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
Raet1bO08603 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC15.08■□□□□ 0
Raet1bO08603 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC15.08■□□□□ 0
Raet1bO08603 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC15.08■□□□□ 0
Raet1bO08603 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
Retrieved 100 of 76,532 protein–RNA pairs in 27.4 ms