Protein–RNA interactions for Protein: J3QP07

B020004C17Rik, RIKEN cDNA B020004C17 gene, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
B020004C17RikJ3QP07 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
B020004C17RikJ3QP07 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC19.05■□□□□ 0.64
B020004C17RikJ3QP07 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
B020004C17RikJ3QP07 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
B020004C17RikJ3QP07 Zfp264-201ENSMUST00000208656 1563 ntBASIC19.05■□□□□ 0.64
B020004C17RikJ3QP07 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
B020004C17RikJ3QP07 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
B020004C17RikJ3QP07 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
B020004C17RikJ3QP07 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
B020004C17RikJ3QP07 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
B020004C17RikJ3QP07 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
B020004C17RikJ3QP07 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
B020004C17RikJ3QP07 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
B020004C17RikJ3QP07 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC19.04■□□□□ 0.64
B020004C17RikJ3QP07 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
B020004C17RikJ3QP07 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
B020004C17RikJ3QP07 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
B020004C17RikJ3QP07 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
B020004C17RikJ3QP07 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC19.03■□□□□ 0.64
B020004C17RikJ3QP07 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
B020004C17RikJ3QP07 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
B020004C17RikJ3QP07 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
B020004C17RikJ3QP07 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
B020004C17RikJ3QP07 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
B020004C17RikJ3QP07 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC19.03■□□□□ 0.64
B020004C17RikJ3QP07 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
B020004C17RikJ3QP07 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
B020004C17RikJ3QP07 Gm1818-201ENSMUST00000169406 1184 ntBASIC19.03■□□□□ 0.64
B020004C17RikJ3QP07 Gm5712-201ENSMUST00000199748 1043 ntBASIC19.03■□□□□ 0.64
B020004C17RikJ3QP07 Gm2651-201ENSMUST00000203560 838 ntBASIC19.03■□□□□ 0.64
B020004C17RikJ3QP07 Gm18206-201ENSMUST00000207027 926 ntBASIC19.03■□□□□ 0.64
B020004C17RikJ3QP07 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
B020004C17RikJ3QP07 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
B020004C17RikJ3QP07 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
B020004C17RikJ3QP07 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
B020004C17RikJ3QP07 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
B020004C17RikJ3QP07 Gm10616-201ENSMUST00000205285 2127 ntBASIC19.03■□□□□ 0.64
B020004C17RikJ3QP07 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
B020004C17RikJ3QP07 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
B020004C17RikJ3QP07 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
B020004C17RikJ3QP07 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
B020004C17RikJ3QP07 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
B020004C17RikJ3QP07 Dmtn-210ENSMUST00000228824 2377 ntBASIC19.02■□□□□ 0.64
B020004C17RikJ3QP07 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
B020004C17RikJ3QP07 Gm7862-201ENSMUST00000121461 292 ntBASIC19.02■□□□□ 0.64
B020004C17RikJ3QP07 Gm13830-205ENSMUST00000201195 1155 ntBASIC19.02■□□□□ 0.64
B020004C17RikJ3QP07 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
B020004C17RikJ3QP07 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
B020004C17RikJ3QP07 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
B020004C17RikJ3QP07 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC19.02■□□□□ 0.64
B020004C17RikJ3QP07 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
B020004C17RikJ3QP07 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
B020004C17RikJ3QP07 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.63
B020004C17RikJ3QP07 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
B020004C17RikJ3QP07 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
B020004C17RikJ3QP07 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
B020004C17RikJ3QP07 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
B020004C17RikJ3QP07 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC19.01■□□□□ 0.63
B020004C17RikJ3QP07 Gm15165-201ENSMUST00000118140 502 ntBASIC19.01■□□□□ 0.63
B020004C17RikJ3QP07 Gm27525-201ENSMUST00000184465 107 ntBASIC19.01■□□□□ 0.63
B020004C17RikJ3QP07 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
B020004C17RikJ3QP07 Gm44454-201ENSMUST00000198541 138 ntBASIC19.01■□□□□ 0.63
B020004C17RikJ3QP07 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
B020004C17RikJ3QP07 Gm6376-201ENSMUST00000209407 580 ntBASIC19.01■□□□□ 0.63
B020004C17RikJ3QP07 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC19.01■□□□□ 0.63
B020004C17RikJ3QP07 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC19.01■□□□□ 0.63
B020004C17RikJ3QP07 Gm6296-201ENSMUST00000222599 943 ntBASIC19.01■□□□□ 0.63
B020004C17RikJ3QP07 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
B020004C17RikJ3QP07 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC19.01■□□□□ 0.63
B020004C17RikJ3QP07 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
B020004C17RikJ3QP07 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC19.01■□□□□ 0.63
B020004C17RikJ3QP07 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
B020004C17RikJ3QP07 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
B020004C17RikJ3QP07 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
B020004C17RikJ3QP07 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
B020004C17RikJ3QP07 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC19■□□□□ 0.63
B020004C17RikJ3QP07 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
B020004C17RikJ3QP07 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
B020004C17RikJ3QP07 Gm44430-201ENSMUST00000203376 995 ntBASIC19■□□□□ 0.63
B020004C17RikJ3QP07 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
B020004C17RikJ3QP07 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
B020004C17RikJ3QP07 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC19■□□□□ 0.63
B020004C17RikJ3QP07 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
B020004C17RikJ3QP07 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
B020004C17RikJ3QP07 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC19■□□□□ 0.63
B020004C17RikJ3QP07 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
B020004C17RikJ3QP07 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC18.99■□□□□ 0.63
B020004C17RikJ3QP07 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
B020004C17RikJ3QP07 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
B020004C17RikJ3QP07 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
B020004C17RikJ3QP07 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
B020004C17RikJ3QP07 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
B020004C17RikJ3QP07 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
B020004C17RikJ3QP07 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
B020004C17RikJ3QP07 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC18.99■□□□□ 0.63
B020004C17RikJ3QP07 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
B020004C17RikJ3QP07 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
B020004C17RikJ3QP07 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
B020004C17RikJ3QP07 AC160338.1-201ENSMUST00000214232 705 ntBASIC18.99■□□□□ 0.63
B020004C17RikJ3QP07 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 50.7 ms