Protein–RNA interactions for Protein: G3X9Z4

Pcf11, Cleavage and polyadenylation factor subunit homolog (S. cerevisiae), mousemouse

Predictions only

Length 1,553 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcf11G3X9Z4 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
Pcf11G3X9Z4 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC25.84■■□□□ 1.73
Pcf11G3X9Z4 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
Pcf11G3X9Z4 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC25.84■■□□□ 1.73
Pcf11G3X9Z4 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
Pcf11G3X9Z4 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
Pcf11G3X9Z4 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
Pcf11G3X9Z4 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC25.83■■□□□ 1.73
Pcf11G3X9Z4 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
Pcf11G3X9Z4 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC25.83■■□□□ 1.73
Pcf11G3X9Z4 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC25.83■■□□□ 1.73
Pcf11G3X9Z4 Mir8098-201ENSMUST00000184011 137 ntBASIC25.83■■□□□ 1.73
Pcf11G3X9Z4 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC25.83■■□□□ 1.73
Pcf11G3X9Z4 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC25.83■■□□□ 1.73
Pcf11G3X9Z4 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC25.83■■□□□ 1.73
Pcf11G3X9Z4 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC25.83■■□□□ 1.73
Pcf11G3X9Z4 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC25.83■■□□□ 1.73
Pcf11G3X9Z4 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC25.83■■□□□ 1.73
Pcf11G3X9Z4 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.72
Pcf11G3X9Z4 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
Pcf11G3X9Z4 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
Pcf11G3X9Z4 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC25.82■■□□□ 1.72
Pcf11G3X9Z4 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC25.82■■□□□ 1.72
Pcf11G3X9Z4 Gm37519-201ENSMUST00000191687 2210 ntBASIC25.82■■□□□ 1.72
Pcf11G3X9Z4 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
Pcf11G3X9Z4 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC25.82■■□□□ 1.72
Pcf11G3X9Z4 Gm15372-201ENSMUST00000120729 834 ntBASIC25.82■■□□□ 1.72
Pcf11G3X9Z4 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC25.82■■□□□ 1.72
Pcf11G3X9Z4 Gm10052-201ENSMUST00000168019 960 ntBASIC25.82■■□□□ 1.72
Pcf11G3X9Z4 AC153794.1-201ENSMUST00000169148 126 ntBASIC25.82■■□□□ 1.72
Pcf11G3X9Z4 AC159301.1-201ENSMUST00000225130 1182 ntBASIC25.82■■□□□ 1.72
Pcf11G3X9Z4 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
Pcf11G3X9Z4 Gm7729-201ENSMUST00000050143 801 ntBASIC25.82■■□□□ 1.72
Pcf11G3X9Z4 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
Pcf11G3X9Z4 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC25.81■■□□□ 1.72
Pcf11G3X9Z4 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
Pcf11G3X9Z4 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
Pcf11G3X9Z4 Gm37194-201ENSMUST00000193092 3031 ntBASIC25.81■■□□□ 1.72
Pcf11G3X9Z4 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC25.81■■□□□ 1.72
Pcf11G3X9Z4 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC25.81■■□□□ 1.72
Pcf11G3X9Z4 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
Pcf11G3X9Z4 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC25.81■■□□□ 1.72
Pcf11G3X9Z4 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
Pcf11G3X9Z4 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
Pcf11G3X9Z4 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC25.81■■□□□ 1.72
Pcf11G3X9Z4 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC25.81■■□□□ 1.72
Pcf11G3X9Z4 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC25.8■■□□□ 1.72
Pcf11G3X9Z4 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC25.8■■□□□ 1.72
Pcf11G3X9Z4 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
Pcf11G3X9Z4 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC25.8■■□□□ 1.72
Pcf11G3X9Z4 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC25.8■■□□□ 1.72
Pcf11G3X9Z4 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC25.8■■□□□ 1.72
Pcf11G3X9Z4 Gm44357-201ENSMUST00000195897 142 ntBASIC25.8■■□□□ 1.72
Pcf11G3X9Z4 Gm19658-201ENSMUST00000196231 138 ntBASIC25.8■■□□□ 1.72
Pcf11G3X9Z4 Gm44367-201ENSMUST00000196836 138 ntBASIC25.8■■□□□ 1.72
Pcf11G3X9Z4 Gm44350-201ENSMUST00000197197 138 ntBASIC25.8■■□□□ 1.72
Pcf11G3X9Z4 Gm44390-201ENSMUST00000197533 144 ntBASIC25.8■■□□□ 1.72
Pcf11G3X9Z4 Gm44313-201ENSMUST00000198018 138 ntBASIC25.8■■□□□ 1.72
Pcf11G3X9Z4 Gm44486-201ENSMUST00000198508 138 ntBASIC25.8■■□□□ 1.72
Pcf11G3X9Z4 Gm44454-201ENSMUST00000198541 138 ntBASIC25.8■■□□□ 1.72
Pcf11G3X9Z4 Gm44314-201ENSMUST00000199263 138 ntBASIC25.8■■□□□ 1.72
Pcf11G3X9Z4 Gm44394-201ENSMUST00000199558 138 ntBASIC25.8■■□□□ 1.72
Pcf11G3X9Z4 Gm44484-201ENSMUST00000199873 138 ntBASIC25.8■■□□□ 1.72
Pcf11G3X9Z4 Gm44466-201ENSMUST00000200264 138 ntBASIC25.8■■□□□ 1.72
Pcf11G3X9Z4 Gm44359-201ENSMUST00000200671 138 ntBASIC25.8■■□□□ 1.72
Pcf11G3X9Z4 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC25.8■■□□□ 1.72
Pcf11G3X9Z4 Gm16499-203ENSMUST00000204633 2177 ntBASIC25.8■■□□□ 1.72
Pcf11G3X9Z4 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
Pcf11G3X9Z4 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC25.8■■□□□ 1.72
Pcf11G3X9Z4 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC25.79■■□□□ 1.72
Pcf11G3X9Z4 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
Pcf11G3X9Z4 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
Pcf11G3X9Z4 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC25.79■■□□□ 1.72
Pcf11G3X9Z4 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
Pcf11G3X9Z4 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
Pcf11G3X9Z4 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC25.79■■□□□ 1.72
Pcf11G3X9Z4 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC25.79■■□□□ 1.72
Pcf11G3X9Z4 Gm43347-201ENSMUST00000200226 580 ntBASIC25.79■■□□□ 1.72
Pcf11G3X9Z4 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC25.79■■□□□ 1.72
Pcf11G3X9Z4 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
Pcf11G3X9Z4 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC25.79■■□□□ 1.72
Pcf11G3X9Z4 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
Pcf11G3X9Z4 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC25.79■■□□□ 1.72
Pcf11G3X9Z4 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC25.79■■□□□ 1.72
Pcf11G3X9Z4 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC25.79■■□□□ 1.72
Pcf11G3X9Z4 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC25.79■■□□□ 1.72
Pcf11G3X9Z4 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
Pcf11G3X9Z4 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
Pcf11G3X9Z4 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
Pcf11G3X9Z4 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC25.79■■□□□ 1.72
Pcf11G3X9Z4 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
Pcf11G3X9Z4 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC25.78■■□□□ 1.72
Pcf11G3X9Z4 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC25.78■■□□□ 1.72
Pcf11G3X9Z4 Cmtm5-203ENSMUST00000227441 610 ntBASIC25.78■■□□□ 1.72
Pcf11G3X9Z4 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC25.78■■□□□ 1.72
Pcf11G3X9Z4 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC25.78■■□□□ 1.72
Pcf11G3X9Z4 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
Pcf11G3X9Z4 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC25.78■■□□□ 1.72
Pcf11G3X9Z4 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
Pcf11G3X9Z4 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC25.78■■□□□ 1.72
Retrieved 100 of 76,532 protein–RNA pairs in 22.6 ms