Protein–RNA interactions for Protein: G3X9F6

Sh3tc1, SH3 domain and tetratricopeptide repeats 1, mousemouse

Predictions only

Length 1,346 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3tc1G3X9F6 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
Sh3tc1G3X9F6 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Sh3tc1G3X9F6 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Sh3tc1G3X9F6 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Sh3tc1G3X9F6 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
Sh3tc1G3X9F6 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Sh3tc1G3X9F6 Gm15372-201ENSMUST00000120729 834 ntBASIC20.6■□□□□ 0.89
Sh3tc1G3X9F6 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
Sh3tc1G3X9F6 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Sh3tc1G3X9F6 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Sh3tc1G3X9F6 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Sh3tc1G3X9F6 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Sh3tc1G3X9F6 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Sh3tc1G3X9F6 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
Sh3tc1G3X9F6 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Sh3tc1G3X9F6 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Sh3tc1G3X9F6 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Sh3tc1G3X9F6 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Sh3tc1G3X9F6 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Sh3tc1G3X9F6 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Sh3tc1G3X9F6 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Sh3tc1G3X9F6 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC20.59■□□□□ 0.89
Sh3tc1G3X9F6 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC20.59■□□□□ 0.89
Sh3tc1G3X9F6 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Sh3tc1G3X9F6 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC20.59■□□□□ 0.89
Sh3tc1G3X9F6 Gm44450-201ENSMUST00000199528 114 ntBASIC20.59■□□□□ 0.89
Sh3tc1G3X9F6 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Sh3tc1G3X9F6 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Sh3tc1G3X9F6 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Sh3tc1G3X9F6 Wnt10b-204ENSMUST00000226655 1807 ntBASIC20.59■□□□□ 0.89
Sh3tc1G3X9F6 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Sh3tc1G3X9F6 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Sh3tc1G3X9F6 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Sh3tc1G3X9F6 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Sh3tc1G3X9F6 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Sh3tc1G3X9F6 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC20.59■□□□□ 0.89
Sh3tc1G3X9F6 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Sh3tc1G3X9F6 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Sh3tc1G3X9F6 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Sh3tc1G3X9F6 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Sh3tc1G3X9F6 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC20.58■□□□□ 0.89
Sh3tc1G3X9F6 Gm10052-201ENSMUST00000168019 960 ntBASIC20.58■□□□□ 0.89
Sh3tc1G3X9F6 Gm29707-201ENSMUST00000196325 491 ntBASIC20.58■□□□□ 0.89
Sh3tc1G3X9F6 Gm6443-201ENSMUST00000203599 874 ntBASIC20.58■□□□□ 0.89
Sh3tc1G3X9F6 Gm7729-201ENSMUST00000050143 801 ntBASIC20.58■□□□□ 0.89
Sh3tc1G3X9F6 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC20.58■□□□□ 0.89
Sh3tc1G3X9F6 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Sh3tc1G3X9F6 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
Sh3tc1G3X9F6 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC20.58■□□□□ 0.89
Sh3tc1G3X9F6 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
Sh3tc1G3X9F6 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Sh3tc1G3X9F6 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Sh3tc1G3X9F6 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Sh3tc1G3X9F6 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Sh3tc1G3X9F6 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Sh3tc1G3X9F6 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Sh3tc1G3X9F6 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC20.57■□□□□ 0.88
Sh3tc1G3X9F6 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC20.57■□□□□ 0.88
Sh3tc1G3X9F6 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC20.57■□□□□ 0.88
Sh3tc1G3X9F6 AC159301.1-201ENSMUST00000225130 1182 ntBASIC20.57■□□□□ 0.88
Sh3tc1G3X9F6 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Sh3tc1G3X9F6 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC20.57■□□□□ 0.88
Sh3tc1G3X9F6 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Sh3tc1G3X9F6 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Sh3tc1G3X9F6 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
Sh3tc1G3X9F6 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Sh3tc1G3X9F6 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Sh3tc1G3X9F6 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Sh3tc1G3X9F6 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
Sh3tc1G3X9F6 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC20.56■□□□□ 0.88
Sh3tc1G3X9F6 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC20.56■□□□□ 0.88
Sh3tc1G3X9F6 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Sh3tc1G3X9F6 Gm18421-201ENSMUST00000204122 625 ntBASIC20.56■□□□□ 0.88
Sh3tc1G3X9F6 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Sh3tc1G3X9F6 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Sh3tc1G3X9F6 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Sh3tc1G3X9F6 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
Sh3tc1G3X9F6 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Sh3tc1G3X9F6 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC20.56■□□□□ 0.88
Sh3tc1G3X9F6 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Sh3tc1G3X9F6 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC20.56■□□□□ 0.88
Sh3tc1G3X9F6 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
Sh3tc1G3X9F6 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Sh3tc1G3X9F6 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC20.56■□□□□ 0.88
Sh3tc1G3X9F6 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Sh3tc1G3X9F6 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Sh3tc1G3X9F6 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Sh3tc1G3X9F6 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC20.55■□□□□ 0.88
Sh3tc1G3X9F6 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC20.55■□□□□ 0.88
Sh3tc1G3X9F6 Gm7935-201ENSMUST00000100555 1278 ntBASIC20.55■□□□□ 0.88
Sh3tc1G3X9F6 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC20.55■□□□□ 0.88
Sh3tc1G3X9F6 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC20.55■□□□□ 0.88
Sh3tc1G3X9F6 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
Sh3tc1G3X9F6 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC20.55■□□□□ 0.88
Sh3tc1G3X9F6 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Sh3tc1G3X9F6 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
Sh3tc1G3X9F6 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Sh3tc1G3X9F6 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC20.55■□□□□ 0.88
Sh3tc1G3X9F6 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Sh3tc1G3X9F6 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 37.3 ms