Protein–RNA interactions for Protein: F6ZNL5

Pcdh11x, Protocadherin 11 X-linked, mousemouse

Predictions only

Length 1,338 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh11xF6ZNL5 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Pcdh11xF6ZNL5 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Pcdh11xF6ZNL5 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC18.85■□□□□ 0.61
Pcdh11xF6ZNL5 Odf3b-204ENSMUST00000227834 930 ntBASIC18.85■□□□□ 0.61
Pcdh11xF6ZNL5 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Pcdh11xF6ZNL5 Gm5417-201ENSMUST00000079706 384 ntBASIC18.85■□□□□ 0.61
Pcdh11xF6ZNL5 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC18.85■□□□□ 0.61
Pcdh11xF6ZNL5 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Pcdh11xF6ZNL5 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Pcdh11xF6ZNL5 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Pcdh11xF6ZNL5 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
Pcdh11xF6ZNL5 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Pcdh11xF6ZNL5 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC18.85■□□□□ 0.61
Pcdh11xF6ZNL5 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Pcdh11xF6ZNL5 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Pcdh11xF6ZNL5 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Pcdh11xF6ZNL5 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Pcdh11xF6ZNL5 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC18.84■□□□□ 0.61
Pcdh11xF6ZNL5 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC18.84■□□□□ 0.61
Pcdh11xF6ZNL5 Gm27000-201ENSMUST00000182943 842 ntBASIC18.84■□□□□ 0.61
Pcdh11xF6ZNL5 Gm3375-201ENSMUST00000203929 796 ntBASIC18.84■□□□□ 0.61
Pcdh11xF6ZNL5 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Pcdh11xF6ZNL5 Otx2os1-204ENSMUST00000227221 751 ntBASIC18.84■□□□□ 0.61
Pcdh11xF6ZNL5 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Pcdh11xF6ZNL5 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Pcdh11xF6ZNL5 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Pcdh11xF6ZNL5 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
Pcdh11xF6ZNL5 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Pcdh11xF6ZNL5 Gm8839-201ENSMUST00000121279 1645 ntBASIC18.84■□□□□ 0.61
Pcdh11xF6ZNL5 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
Pcdh11xF6ZNL5 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Pcdh11xF6ZNL5 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Pcdh11xF6ZNL5 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC18.83■□□□□ 0.61
Pcdh11xF6ZNL5 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Pcdh11xF6ZNL5 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Pcdh11xF6ZNL5 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC18.83■□□□□ 0.61
Pcdh11xF6ZNL5 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC18.83■□□□□ 0.61
Pcdh11xF6ZNL5 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Pcdh11xF6ZNL5 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC18.83■□□□□ 0.61
Pcdh11xF6ZNL5 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Pcdh11xF6ZNL5 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
Pcdh11xF6ZNL5 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.61
Pcdh11xF6ZNL5 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
Pcdh11xF6ZNL5 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Pcdh11xF6ZNL5 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Pcdh11xF6ZNL5 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Pcdh11xF6ZNL5 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Pcdh11xF6ZNL5 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC18.82■□□□□ 0.6
Pcdh11xF6ZNL5 Gm45774-201ENSMUST00000211992 2665 ntBASIC18.82■□□□□ 0.6
Pcdh11xF6ZNL5 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
Pcdh11xF6ZNL5 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
Pcdh11xF6ZNL5 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
Pcdh11xF6ZNL5 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
Pcdh11xF6ZNL5 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
Pcdh11xF6ZNL5 Gm20472-201ENSMUST00000174403 1240 ntBASIC18.82■□□□□ 0.6
Pcdh11xF6ZNL5 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Pcdh11xF6ZNL5 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Pcdh11xF6ZNL5 AC156016.1-201ENSMUST00000227190 1035 ntBASIC18.82■□□□□ 0.6
Pcdh11xF6ZNL5 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Pcdh11xF6ZNL5 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
Pcdh11xF6ZNL5 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Pcdh11xF6ZNL5 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Pcdh11xF6ZNL5 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC18.82■□□□□ 0.6
Pcdh11xF6ZNL5 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
Pcdh11xF6ZNL5 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Pcdh11xF6ZNL5 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Pcdh11xF6ZNL5 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC18.82■□□□□ 0.6
Pcdh11xF6ZNL5 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
Pcdh11xF6ZNL5 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Pcdh11xF6ZNL5 Haglr-201ENSMUST00000100000 2085 ntBASIC18.81■□□□□ 0.6
Pcdh11xF6ZNL5 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC18.81■□□□□ 0.6
Pcdh11xF6ZNL5 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
Pcdh11xF6ZNL5 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Pcdh11xF6ZNL5 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC18.81■□□□□ 0.6
Pcdh11xF6ZNL5 Arhgef4-208ENSMUST00000211073 171 ntBASIC18.81■□□□□ 0.6
Pcdh11xF6ZNL5 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC18.81■□□□□ 0.6
Pcdh11xF6ZNL5 AC120002.2-201ENSMUST00000220205 773 ntBASIC18.81■□□□□ 0.6
Pcdh11xF6ZNL5 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC18.81■□□□□ 0.6
Pcdh11xF6ZNL5 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Pcdh11xF6ZNL5 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Pcdh11xF6ZNL5 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Pcdh11xF6ZNL5 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Pcdh11xF6ZNL5 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
Pcdh11xF6ZNL5 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC18.81■□□□□ 0.6
Pcdh11xF6ZNL5 Gm10461-201ENSMUST00000202073 4786 ntBASIC18.81■□□□□ 0.6
Pcdh11xF6ZNL5 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Pcdh11xF6ZNL5 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Pcdh11xF6ZNL5 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Pcdh11xF6ZNL5 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Pcdh11xF6ZNL5 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Pcdh11xF6ZNL5 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Pcdh11xF6ZNL5 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Pcdh11xF6ZNL5 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC18.8■□□□□ 0.6
Pcdh11xF6ZNL5 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Pcdh11xF6ZNL5 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Pcdh11xF6ZNL5 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
Pcdh11xF6ZNL5 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Pcdh11xF6ZNL5 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
Pcdh11xF6ZNL5 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
Pcdh11xF6ZNL5 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 19.4 ms