Protein–RNA interactions for Protein: F6ZDS4

Tpr, Nucleoprotein TPR, mousemouse

Known RBP Predictions only

Length 2,431 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TprF6ZDS4 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
TprF6ZDS4 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
TprF6ZDS4 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC15.63■□□□□ 0.09
TprF6ZDS4 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
TprF6ZDS4 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
TprF6ZDS4 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
TprF6ZDS4 Gm43231-201ENSMUST00000202960 2258 ntBASIC15.63■□□□□ 0.09
TprF6ZDS4 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
TprF6ZDS4 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
TprF6ZDS4 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
TprF6ZDS4 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
TprF6ZDS4 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
TprF6ZDS4 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
TprF6ZDS4 Gm15165-201ENSMUST00000118140 502 ntBASIC15.62■□□□□ 0.09
TprF6ZDS4 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
TprF6ZDS4 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
TprF6ZDS4 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC15.62■□□□□ 0.09
TprF6ZDS4 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC15.62■□□□□ 0.09
TprF6ZDS4 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC15.62■□□□□ 0.09
TprF6ZDS4 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC15.62■□□□□ 0.09
TprF6ZDS4 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
TprF6ZDS4 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
TprF6ZDS4 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
TprF6ZDS4 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
TprF6ZDS4 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
TprF6ZDS4 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
TprF6ZDS4 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC15.62■□□□□ 0.09
TprF6ZDS4 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC15.62■□□□□ 0.09
TprF6ZDS4 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC15.62■□□□□ 0.09
TprF6ZDS4 Gm5364-201ENSMUST00000216789 889 ntBASIC15.62■□□□□ 0.09
TprF6ZDS4 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
TprF6ZDS4 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC15.61■□□□□ 0.09
TprF6ZDS4 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
TprF6ZDS4 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
TprF6ZDS4 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
TprF6ZDS4 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
TprF6ZDS4 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
TprF6ZDS4 Ighv6-1-201ENSMUST00000193612 343 ntBASIC15.61■□□□□ 0.09
TprF6ZDS4 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
TprF6ZDS4 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC15.61■□□□□ 0.09
TprF6ZDS4 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC15.61■□□□□ 0.09
TprF6ZDS4 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
TprF6ZDS4 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC15.61■□□□□ 0.09
TprF6ZDS4 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
TprF6ZDS4 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
TprF6ZDS4 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
TprF6ZDS4 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
TprF6ZDS4 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC15.6■□□□□ 0.09
TprF6ZDS4 Pts-201ENSMUST00000034570 1046 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
TprF6ZDS4 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
TprF6ZDS4 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
TprF6ZDS4 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC15.6■□□□□ 0.09
TprF6ZDS4 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
TprF6ZDS4 Mkl2-203ENSMUST00000115809 667 ntTSL 2 BASIC15.6■□□□□ 0.09
TprF6ZDS4 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
TprF6ZDS4 Gm29791-202ENSMUST00000207888 369 ntBASIC15.6■□□□□ 0.09
TprF6ZDS4 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
TprF6ZDS4 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
TprF6ZDS4 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
TprF6ZDS4 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
TprF6ZDS4 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC15.6■□□□□ 0.09
TprF6ZDS4 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
TprF6ZDS4 Gm45906-201ENSMUST00000208911 1430 ntBASIC15.59■□□□□ 0.09
TprF6ZDS4 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
TprF6ZDS4 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
TprF6ZDS4 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
TprF6ZDS4 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
TprF6ZDS4 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
TprF6ZDS4 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
TprF6ZDS4 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
TprF6ZDS4 Qdpr-204ENSMUST00000120867 1234 ntTSL 5 BASIC15.59■□□□□ 0.09
TprF6ZDS4 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC15.59■□□□□ 0.09
TprF6ZDS4 Nudt6-208ENSMUST00000146324 1264 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
TprF6ZDS4 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC15.59■□□□□ 0.09
TprF6ZDS4 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC15.59■□□□□ 0.09
TprF6ZDS4 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC15.59■□□□□ 0.09
TprF6ZDS4 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
TprF6ZDS4 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
TprF6ZDS4 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
TprF6ZDS4 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
TprF6ZDS4 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.09
TprF6ZDS4 Gm10461-201ENSMUST00000202073 4786 ntBASIC15.58■□□□□ 0.09
TprF6ZDS4 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC15.58■□□□□ 0.09
TprF6ZDS4 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.09
TprF6ZDS4 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
TprF6ZDS4 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.09
TprF6ZDS4 Gm8000-201ENSMUST00000188378 592 ntBASIC15.58■□□□□ 0.09
TprF6ZDS4 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC15.58■□□□□ 0.09
TprF6ZDS4 Dmtn-210ENSMUST00000228824 2377 ntBASIC15.58■□□□□ 0.09
TprF6ZDS4 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC15.58■□□□□ 0.09
TprF6ZDS4 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.09
TprF6ZDS4 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
TprF6ZDS4 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC15.58■□□□□ 0.08
TprF6ZDS4 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
TprF6ZDS4 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
TprF6ZDS4 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC15.58■□□□□ 0.08
TprF6ZDS4 Gm15706-201ENSMUST00000139612 899 ntTSL 2 BASIC15.58■□□□□ 0.08
TprF6ZDS4 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
TprF6ZDS4 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
TprF6ZDS4 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC15.58■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 25.6 ms