Protein–RNA interactions for Protein: E9Q2N0

Cpsf4l, Cleavage and polyadenylation-specific factor 4-like, mousemouse

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf4lE9Q2N0 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Cpsf4lE9Q2N0 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Cpsf4lE9Q2N0 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
Cpsf4lE9Q2N0 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
Cpsf4lE9Q2N0 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Cpsf4lE9Q2N0 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Cpsf4lE9Q2N0 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
Cpsf4lE9Q2N0 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Cpsf4lE9Q2N0 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Cpsf4lE9Q2N0 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Cpsf4lE9Q2N0 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Cpsf4lE9Q2N0 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC14.45□□□□□ -0.1
Cpsf4lE9Q2N0 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC14.45□□□□□ -0.1
Cpsf4lE9Q2N0 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cpsf4lE9Q2N0 Gm15565-201ENSMUST00000118890 427 ntBASIC14.45□□□□□ -0.1
Cpsf4lE9Q2N0 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC14.45□□□□□ -0.1
Cpsf4lE9Q2N0 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cpsf4lE9Q2N0 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC14.45□□□□□ -0.1
Cpsf4lE9Q2N0 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC14.45□□□□□ -0.1
Cpsf4lE9Q2N0 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cpsf4lE9Q2N0 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC14.45□□□□□ -0.1
Cpsf4lE9Q2N0 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cpsf4lE9Q2N0 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Cpsf4lE9Q2N0 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cpsf4lE9Q2N0 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cpsf4lE9Q2N0 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cpsf4lE9Q2N0 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Cpsf4lE9Q2N0 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cpsf4lE9Q2N0 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Cpsf4lE9Q2N0 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cpsf4lE9Q2N0 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cpsf4lE9Q2N0 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cpsf4lE9Q2N0 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cpsf4lE9Q2N0 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Cpsf4lE9Q2N0 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Cpsf4lE9Q2N0 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Cpsf4lE9Q2N0 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cpsf4lE9Q2N0 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cpsf4lE9Q2N0 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC14.44□□□□□ -0.1
Cpsf4lE9Q2N0 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cpsf4lE9Q2N0 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cpsf4lE9Q2N0 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Cpsf4lE9Q2N0 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cpsf4lE9Q2N0 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
Cpsf4lE9Q2N0 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cpsf4lE9Q2N0 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
Cpsf4lE9Q2N0 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cpsf4lE9Q2N0 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Cpsf4lE9Q2N0 Gm19439-201ENSMUST00000198195 2273 ntBASIC14.44□□□□□ -0.1
Cpsf4lE9Q2N0 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cpsf4lE9Q2N0 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Cpsf4lE9Q2N0 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Cpsf4lE9Q2N0 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC14.43□□□□□ -0.1
Cpsf4lE9Q2N0 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Cpsf4lE9Q2N0 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cpsf4lE9Q2N0 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Cpsf4lE9Q2N0 Gm13559-201ENSMUST00000120476 863 ntBASIC14.43□□□□□ -0.1
Cpsf4lE9Q2N0 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC14.43□□□□□ -0.1
Cpsf4lE9Q2N0 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC14.43□□□□□ -0.1
Cpsf4lE9Q2N0 Gm27000-201ENSMUST00000182943 842 ntBASIC14.43□□□□□ -0.1
Cpsf4lE9Q2N0 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC14.43□□□□□ -0.1
Cpsf4lE9Q2N0 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
Cpsf4lE9Q2N0 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cpsf4lE9Q2N0 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cpsf4lE9Q2N0 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cpsf4lE9Q2N0 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cpsf4lE9Q2N0 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cpsf4lE9Q2N0 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC14.43□□□□□ -0.1
Cpsf4lE9Q2N0 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Cpsf4lE9Q2N0 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cpsf4lE9Q2N0 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cpsf4lE9Q2N0 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cpsf4lE9Q2N0 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cpsf4lE9Q2N0 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cpsf4lE9Q2N0 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC14.42□□□□□ -0.1
Cpsf4lE9Q2N0 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cpsf4lE9Q2N0 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cpsf4lE9Q2N0 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Cpsf4lE9Q2N0 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cpsf4lE9Q2N0 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cpsf4lE9Q2N0 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cpsf4lE9Q2N0 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cpsf4lE9Q2N0 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cpsf4lE9Q2N0 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cpsf4lE9Q2N0 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Cpsf4lE9Q2N0 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cpsf4lE9Q2N0 Gm43799-201ENSMUST00000201845 579 ntBASIC14.42□□□□□ -0.1
Cpsf4lE9Q2N0 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC14.42□□□□□ -0.1
Cpsf4lE9Q2N0 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Cpsf4lE9Q2N0 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cpsf4lE9Q2N0 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cpsf4lE9Q2N0 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Cpsf4lE9Q2N0 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Cpsf4lE9Q2N0 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cpsf4lE9Q2N0 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Cpsf4lE9Q2N0 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cpsf4lE9Q2N0 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC14.42□□□□□ -0.1
Cpsf4lE9Q2N0 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Cpsf4lE9Q2N0 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cpsf4lE9Q2N0 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC14.42□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 19.7 ms