Protein–RNA interactions for Protein: E9Q0B4

Cdr1, Cerebellar degeneration-related antigen 1, mousemouse

Predictions only

Length 517 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdr1E9Q0B4 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Cdr1E9Q0B4 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC16.9■□□□□ 0.3
Cdr1E9Q0B4 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Cdr1E9Q0B4 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Cdr1E9Q0B4 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Cdr1E9Q0B4 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Cdr1E9Q0B4 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Cdr1E9Q0B4 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Cdr1E9Q0B4 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Cdr1E9Q0B4 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Cdr1E9Q0B4 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Cdr1E9Q0B4 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Cdr1E9Q0B4 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Cdr1E9Q0B4 Gm16499-203ENSMUST00000204633 2177 ntBASIC16.89■□□□□ 0.3
Cdr1E9Q0B4 Iqsec3-201ENSMUST00000046373 6840 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Cdr1E9Q0B4 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
Cdr1E9Q0B4 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Cdr1E9Q0B4 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Cdr1E9Q0B4 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Cdr1E9Q0B4 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC16.89■□□□□ 0.29
Cdr1E9Q0B4 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Cdr1E9Q0B4 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC16.89■□□□□ 0.29
Cdr1E9Q0B4 Mir8112-201ENSMUST00000184382 131 ntBASIC16.89■□□□□ 0.29
Cdr1E9Q0B4 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Cdr1E9Q0B4 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Cdr1E9Q0B4 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Cdr1E9Q0B4 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Cdr1E9Q0B4 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Cdr1E9Q0B4 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC16.89■□□□□ 0.29
Cdr1E9Q0B4 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Cdr1E9Q0B4 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC16.89■□□□□ 0.29
Cdr1E9Q0B4 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Cdr1E9Q0B4 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Cdr1E9Q0B4 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Cdr1E9Q0B4 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Cdr1E9Q0B4 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Cdr1E9Q0B4 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC16.88■□□□□ 0.29
Cdr1E9Q0B4 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC16.88■□□□□ 0.29
Cdr1E9Q0B4 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Cdr1E9Q0B4 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Cdr1E9Q0B4 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC16.88■□□□□ 0.29
Cdr1E9Q0B4 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC16.88■□□□□ 0.29
Cdr1E9Q0B4 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Cdr1E9Q0B4 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
Cdr1E9Q0B4 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Cdr1E9Q0B4 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Cdr1E9Q0B4 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Cdr1E9Q0B4 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Cdr1E9Q0B4 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Cdr1E9Q0B4 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Cdr1E9Q0B4 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Cdr1E9Q0B4 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Cdr1E9Q0B4 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Cdr1E9Q0B4 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Cdr1E9Q0B4 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Cdr1E9Q0B4 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Cdr1E9Q0B4 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
Cdr1E9Q0B4 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Cdr1E9Q0B4 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Cdr1E9Q0B4 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC16.87■□□□□ 0.29
Cdr1E9Q0B4 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Cdr1E9Q0B4 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Cdr1E9Q0B4 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Cdr1E9Q0B4 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Cdr1E9Q0B4 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Cdr1E9Q0B4 Rps24-207ENSMUST00000224568 714 ntBASIC16.87■□□□□ 0.29
Cdr1E9Q0B4 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
Cdr1E9Q0B4 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Cdr1E9Q0B4 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Cdr1E9Q0B4 Kdm7a-201ENSMUST00000002305 9566 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Cdr1E9Q0B4 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Cdr1E9Q0B4 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Cdr1E9Q0B4 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Cdr1E9Q0B4 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Cdr1E9Q0B4 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Cdr1E9Q0B4 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Cdr1E9Q0B4 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
Cdr1E9Q0B4 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Cdr1E9Q0B4 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Cdr1E9Q0B4 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Cdr1E9Q0B4 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Cdr1E9Q0B4 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Cdr1E9Q0B4 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Cdr1E9Q0B4 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Cdr1E9Q0B4 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
Cdr1E9Q0B4 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Cdr1E9Q0B4 Gm8493-201ENSMUST00000196881 489 ntBASIC16.86■□□□□ 0.29
Cdr1E9Q0B4 Gm43173-201ENSMUST00000202246 593 ntBASIC16.86■□□□□ 0.29
Cdr1E9Q0B4 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
Cdr1E9Q0B4 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC16.86■□□□□ 0.29
Cdr1E9Q0B4 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Cdr1E9Q0B4 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Cdr1E9Q0B4 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Cdr1E9Q0B4 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Cdr1E9Q0B4 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
Cdr1E9Q0B4 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
Cdr1E9Q0B4 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Cdr1E9Q0B4 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Cdr1E9Q0B4 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC16.86■□□□□ 0.29
Cdr1E9Q0B4 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 22.4 ms