Protein–RNA interactions for Protein: D3YZU1

Shank1, SH3 and multiple ankyrin repeat domains protein 1, mousemouse

Predictions only

Length 2,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shank1D3YZU1 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Shank1D3YZU1 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC15.23■□□□□ 0.03
Shank1D3YZU1 AC161829.1-201ENSMUST00000220298 281 ntBASIC15.23■□□□□ 0.03
Shank1D3YZU1 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC15.23■□□□□ 0.03
Shank1D3YZU1 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC15.22■□□□□ 0.03
Shank1D3YZU1 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Shank1D3YZU1 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Shank1D3YZU1 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
Shank1D3YZU1 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Shank1D3YZU1 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Shank1D3YZU1 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
Shank1D3YZU1 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Shank1D3YZU1 Rps4l-201ENSMUST00000071745 943 ntBASIC15.22■□□□□ 0.03
Shank1D3YZU1 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
Shank1D3YZU1 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Shank1D3YZU1 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Shank1D3YZU1 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC15.22■□□□□ 0.03
Shank1D3YZU1 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Shank1D3YZU1 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC15.22■□□□□ 0.03
Shank1D3YZU1 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Shank1D3YZU1 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Shank1D3YZU1 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC15.22■□□□□ 0.03
Shank1D3YZU1 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Shank1D3YZU1 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Shank1D3YZU1 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC15.22■□□□□ 0.03
Shank1D3YZU1 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC15.22■□□□□ 0.03
Shank1D3YZU1 AC122351.1-201ENSMUST00000220467 126 ntBASIC15.22■□□□□ 0.03
Shank1D3YZU1 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
Shank1D3YZU1 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Shank1D3YZU1 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Shank1D3YZU1 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Shank1D3YZU1 Fam105a-203ENSMUST00000226170 3043 ntBASIC15.22■□□□□ 0.03
Shank1D3YZU1 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC15.22■□□□□ 0.03
Shank1D3YZU1 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Shank1D3YZU1 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Shank1D3YZU1 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Shank1D3YZU1 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Shank1D3YZU1 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
Shank1D3YZU1 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Shank1D3YZU1 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Shank1D3YZU1 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC15.21■□□□□ 0.03
Shank1D3YZU1 Mir5126-201ENSMUST00000175513 77 ntBASIC15.21■□□□□ 0.03
Shank1D3YZU1 Gm9449-201ENSMUST00000207265 1011 ntBASIC15.21■□□□□ 0.03
Shank1D3YZU1 Gm18195-201ENSMUST00000207604 706 ntBASIC15.21■□□□□ 0.03
Shank1D3YZU1 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC15.21■□□□□ 0.03
Shank1D3YZU1 Vti1a-206ENSMUST00000225529 1244 ntBASIC15.21■□□□□ 0.03
Shank1D3YZU1 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Shank1D3YZU1 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
Shank1D3YZU1 Gm43213-201ENSMUST00000151866 1790 ntBASIC15.21■□□□□ 0.03
Shank1D3YZU1 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
Shank1D3YZU1 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
Shank1D3YZU1 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Shank1D3YZU1 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Shank1D3YZU1 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
Shank1D3YZU1 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Shank1D3YZU1 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.02
Shank1D3YZU1 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC15.21■□□□□ 0.02
Shank1D3YZU1 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Shank1D3YZU1 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.02
Shank1D3YZU1 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Shank1D3YZU1 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Shank1D3YZU1 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
Shank1D3YZU1 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
Shank1D3YZU1 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Shank1D3YZU1 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Shank1D3YZU1 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Shank1D3YZU1 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Shank1D3YZU1 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Shank1D3YZU1 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Shank1D3YZU1 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Shank1D3YZU1 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Shank1D3YZU1 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Shank1D3YZU1 Zkscan4-202ENSMUST00000225845 1506 ntBASIC15.2■□□□□ 0.02
Shank1D3YZU1 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Shank1D3YZU1 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC15.2■□□□□ 0.02
Shank1D3YZU1 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC15.2■□□□□ 0.02
Shank1D3YZU1 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Shank1D3YZU1 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Shank1D3YZU1 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Shank1D3YZU1 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Shank1D3YZU1 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Shank1D3YZU1 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Shank1D3YZU1 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC15.19■□□□□ 0.02
Shank1D3YZU1 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Shank1D3YZU1 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Shank1D3YZU1 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC15.19■□□□□ 0.02
Shank1D3YZU1 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
Shank1D3YZU1 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Shank1D3YZU1 Gm11336-201ENSMUST00000118168 334 ntBASIC15.19■□□□□ 0.02
Shank1D3YZU1 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Shank1D3YZU1 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC15.19■□□□□ 0.02
Shank1D3YZU1 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Shank1D3YZU1 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Shank1D3YZU1 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Shank1D3YZU1 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
Shank1D3YZU1 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Shank1D3YZU1 Gm37374-201ENSMUST00000194954 1829 ntBASIC15.19■□□□□ 0.02
Shank1D3YZU1 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC15.19■□□□□ 0.02
Shank1D3YZU1 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Shank1D3YZU1 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 37.8 ms