Protein–RNA interactions for Protein: D3YVI9

Trim30c, Tripartite motif-containing 30C, mousemouse

Predictions only

Length 513 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim30cD3YVI9 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC18.64■□□□□ 0.57
Trim30cD3YVI9 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Trim30cD3YVI9 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Trim30cD3YVI9 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Trim30cD3YVI9 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Trim30cD3YVI9 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Trim30cD3YVI9 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Trim30cD3YVI9 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Trim30cD3YVI9 AC154231.1-201ENSMUST00000220564 2175 ntBASIC18.64■□□□□ 0.57
Trim30cD3YVI9 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Trim30cD3YVI9 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
Trim30cD3YVI9 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Trim30cD3YVI9 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Trim30cD3YVI9 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
Trim30cD3YVI9 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
Trim30cD3YVI9 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC18.63■□□□□ 0.57
Trim30cD3YVI9 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
Trim30cD3YVI9 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC18.63■□□□□ 0.57
Trim30cD3YVI9 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Trim30cD3YVI9 Gm10698-201ENSMUST00000182663 604 ntBASIC18.63■□□□□ 0.57
Trim30cD3YVI9 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC18.63■□□□□ 0.57
Trim30cD3YVI9 Gm10138-203ENSMUST00000206952 366 ntBASIC18.63■□□□□ 0.57
Trim30cD3YVI9 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Trim30cD3YVI9 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Trim30cD3YVI9 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Trim30cD3YVI9 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Trim30cD3YVI9 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Trim30cD3YVI9 Gm5421-201ENSMUST00000181698 2354 ntBASIC18.63■□□□□ 0.57
Trim30cD3YVI9 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
Trim30cD3YVI9 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Trim30cD3YVI9 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Trim30cD3YVI9 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Trim30cD3YVI9 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Trim30cD3YVI9 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Trim30cD3YVI9 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Trim30cD3YVI9 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Trim30cD3YVI9 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC18.62■□□□□ 0.57
Trim30cD3YVI9 Gm15378-201ENSMUST00000121894 207 ntBASIC18.62■□□□□ 0.57
Trim30cD3YVI9 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Trim30cD3YVI9 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC18.62■□□□□ 0.57
Trim30cD3YVI9 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Trim30cD3YVI9 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC18.62■□□□□ 0.57
Trim30cD3YVI9 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC18.62■□□□□ 0.57
Trim30cD3YVI9 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Trim30cD3YVI9 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Trim30cD3YVI9 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Trim30cD3YVI9 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Trim30cD3YVI9 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Trim30cD3YVI9 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Trim30cD3YVI9 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Trim30cD3YVI9 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
Trim30cD3YVI9 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
Trim30cD3YVI9 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Trim30cD3YVI9 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
Trim30cD3YVI9 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC18.61■□□□□ 0.57
Trim30cD3YVI9 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC18.61■□□□□ 0.57
Trim30cD3YVI9 Gm45774-201ENSMUST00000211992 2665 ntBASIC18.61■□□□□ 0.57
Trim30cD3YVI9 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Trim30cD3YVI9 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Trim30cD3YVI9 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Trim30cD3YVI9 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Trim30cD3YVI9 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Trim30cD3YVI9 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
Trim30cD3YVI9 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Trim30cD3YVI9 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Trim30cD3YVI9 Gm8969-201ENSMUST00000199694 526 ntBASIC18.61■□□□□ 0.57
Trim30cD3YVI9 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
Trim30cD3YVI9 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Trim30cD3YVI9 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Trim30cD3YVI9 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Trim30cD3YVI9 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Trim30cD3YVI9 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
Trim30cD3YVI9 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Trim30cD3YVI9 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Trim30cD3YVI9 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Trim30cD3YVI9 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Trim30cD3YVI9 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Trim30cD3YVI9 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Trim30cD3YVI9 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Trim30cD3YVI9 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC18.6■□□□□ 0.57
Trim30cD3YVI9 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Trim30cD3YVI9 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Trim30cD3YVI9 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
Trim30cD3YVI9 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Trim30cD3YVI9 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Trim30cD3YVI9 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Trim30cD3YVI9 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Trim30cD3YVI9 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
Trim30cD3YVI9 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Trim30cD3YVI9 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Trim30cD3YVI9 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Trim30cD3YVI9 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Trim30cD3YVI9 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Trim30cD3YVI9 Cxcl14-202ENSMUST00000224801 1467 ntBASIC18.59■□□□□ 0.57
Trim30cD3YVI9 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Trim30cD3YVI9 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Trim30cD3YVI9 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC18.59■□□□□ 0.57
Trim30cD3YVI9 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Trim30cD3YVI9 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Trim30cD3YVI9 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC18.59■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 19.6 ms