Protein–RNA interactions for Protein: B1AVM1

Gm12887, Predicted gene 12887, mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm12887B1AVM1 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Gm12887B1AVM1 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Gm12887B1AVM1 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
Gm12887B1AVM1 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Gm12887B1AVM1 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
Gm12887B1AVM1 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Gm12887B1AVM1 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Gm12887B1AVM1 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC13.85□□□□□ -0.19
Gm12887B1AVM1 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC13.85□□□□□ -0.19
Gm12887B1AVM1 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
Gm12887B1AVM1 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Gm12887B1AVM1 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC13.85□□□□□ -0.19
Gm12887B1AVM1 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Gm12887B1AVM1 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Gm12887B1AVM1 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Gm12887B1AVM1 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC13.85□□□□□ -0.19
Gm12887B1AVM1 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC13.85□□□□□ -0.19
Gm12887B1AVM1 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Gm12887B1AVM1 Gm6420-201ENSMUST00000193885 723 ntBASIC13.85□□□□□ -0.19
Gm12887B1AVM1 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC13.85□□□□□ -0.19
Gm12887B1AVM1 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC13.85□□□□□ -0.19
Gm12887B1AVM1 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC13.85□□□□□ -0.19
Gm12887B1AVM1 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Gm12887B1AVM1 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Gm12887B1AVM1 Gm37820-201ENSMUST00000194021 2147 ntBASIC13.85□□□□□ -0.19
Gm12887B1AVM1 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Gm12887B1AVM1 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Gm12887B1AVM1 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Gm12887B1AVM1 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Gm12887B1AVM1 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC13.85□□□□□ -0.19
Gm12887B1AVM1 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Gm12887B1AVM1 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Gm12887B1AVM1 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Gm12887B1AVM1 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC13.84□□□□□ -0.19
Gm12887B1AVM1 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC13.84□□□□□ -0.19
Gm12887B1AVM1 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Gm12887B1AVM1 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Gm12887B1AVM1 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Gm12887B1AVM1 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Gm12887B1AVM1 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
Gm12887B1AVM1 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Gm12887B1AVM1 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Gm12887B1AVM1 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Gm12887B1AVM1 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Gm12887B1AVM1 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Gm12887B1AVM1 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Gm12887B1AVM1 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC13.84□□□□□ -0.19
Gm12887B1AVM1 Appbp2os-202ENSMUST00000206972 447 ntBASIC13.84□□□□□ -0.19
Gm12887B1AVM1 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC13.84□□□□□ -0.19
Gm12887B1AVM1 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
Gm12887B1AVM1 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Gm12887B1AVM1 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Gm12887B1AVM1 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Gm12887B1AVM1 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Gm12887B1AVM1 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Gm12887B1AVM1 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC13.84□□□□□ -0.19
Gm12887B1AVM1 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC13.84□□□□□ -0.19
Gm12887B1AVM1 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Gm12887B1AVM1 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Gm12887B1AVM1 Gm10129-202ENSMUST00000193100 1316 ntBASIC13.84□□□□□ -0.19
Gm12887B1AVM1 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
Gm12887B1AVM1 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Gm12887B1AVM1 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Gm12887B1AVM1 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Gm12887B1AVM1 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.19
Gm12887B1AVM1 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Gm12887B1AVM1 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Gm12887B1AVM1 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Gm12887B1AVM1 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Gm12887B1AVM1 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Gm12887B1AVM1 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Gm12887B1AVM1 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
Gm12887B1AVM1 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC13.83□□□□□ -0.2
Gm12887B1AVM1 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Gm12887B1AVM1 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Gm12887B1AVM1 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC13.83□□□□□ -0.2
Gm12887B1AVM1 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC13.83□□□□□ -0.2
Gm12887B1AVM1 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC13.83□□□□□ -0.2
Gm12887B1AVM1 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Gm12887B1AVM1 Gm45417-201ENSMUST00000209533 758 ntBASIC13.83□□□□□ -0.2
Gm12887B1AVM1 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
Gm12887B1AVM1 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
Gm12887B1AVM1 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Gm12887B1AVM1 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
Gm12887B1AVM1 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Gm12887B1AVM1 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
Gm12887B1AVM1 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Gm12887B1AVM1 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Gm12887B1AVM1 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Gm12887B1AVM1 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
Gm12887B1AVM1 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC13.83□□□□□ -0.2
Gm12887B1AVM1 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Gm12887B1AVM1 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC13.83□□□□□ -0.2
Gm12887B1AVM1 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Gm12887B1AVM1 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Gm12887B1AVM1 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Gm12887B1AVM1 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC13.83□□□□□ -0.2
Gm12887B1AVM1 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
Gm12887B1AVM1 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Gm12887B1AVM1 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 29.6 ms