Protein–RNA interactions for Protein: B1AVK5

Col4a6, Collagen, type IV, alpha 6, mousemouse

Predictions only

Length 1,691 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a6B1AVK5 Gm13830-205ENSMUST00000201195 1155 ntBASIC17.57■□□□□ 0.4
Col4a6B1AVK5 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC17.57■□□□□ 0.4
Col4a6B1AVK5 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC17.57■□□□□ 0.4
Col4a6B1AVK5 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Col4a6B1AVK5 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Col4a6B1AVK5 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Col4a6B1AVK5 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
Col4a6B1AVK5 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Col4a6B1AVK5 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
Col4a6B1AVK5 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
Col4a6B1AVK5 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Col4a6B1AVK5 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC17.57■□□□□ 0.4
Col4a6B1AVK5 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Col4a6B1AVK5 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Col4a6B1AVK5 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
Col4a6B1AVK5 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Col4a6B1AVK5 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Col4a6B1AVK5 Gm12350-201ENSMUST00000121208 462 ntBASIC17.56■□□□□ 0.4
Col4a6B1AVK5 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Col4a6B1AVK5 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Col4a6B1AVK5 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC17.56■□□□□ 0.4
Col4a6B1AVK5 AC160338.1-201ENSMUST00000214232 705 ntBASIC17.56■□□□□ 0.4
Col4a6B1AVK5 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Col4a6B1AVK5 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Col4a6B1AVK5 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Col4a6B1AVK5 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Col4a6B1AVK5 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC17.55■□□□□ 0.4
Col4a6B1AVK5 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Col4a6B1AVK5 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC17.55■□□□□ 0.4
Col4a6B1AVK5 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Col4a6B1AVK5 Gm44430-201ENSMUST00000203376 995 ntBASIC17.55■□□□□ 0.4
Col4a6B1AVK5 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Col4a6B1AVK5 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Col4a6B1AVK5 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
Col4a6B1AVK5 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Col4a6B1AVK5 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Col4a6B1AVK5 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Col4a6B1AVK5 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Col4a6B1AVK5 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Col4a6B1AVK5 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Col4a6B1AVK5 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC17.55■□□□□ 0.4
Col4a6B1AVK5 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Col4a6B1AVK5 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Col4a6B1AVK5 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Col4a6B1AVK5 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
Col4a6B1AVK5 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Col4a6B1AVK5 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Col4a6B1AVK5 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Col4a6B1AVK5 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Col4a6B1AVK5 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Col4a6B1AVK5 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC17.54■□□□□ 0.4
Col4a6B1AVK5 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC17.54■□□□□ 0.4
Col4a6B1AVK5 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Col4a6B1AVK5 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Col4a6B1AVK5 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Col4a6B1AVK5 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC17.54■□□□□ 0.4
Col4a6B1AVK5 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Col4a6B1AVK5 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Col4a6B1AVK5 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Col4a6B1AVK5 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Col4a6B1AVK5 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Col4a6B1AVK5 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC17.54■□□□□ 0.4
Col4a6B1AVK5 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Col4a6B1AVK5 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Col4a6B1AVK5 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Col4a6B1AVK5 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Col4a6B1AVK5 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Col4a6B1AVK5 Gm1401-201ENSMUST00000122048 772 ntBASIC17.53■□□□□ 0.4
Col4a6B1AVK5 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC17.53■□□□□ 0.4
Col4a6B1AVK5 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Col4a6B1AVK5 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC17.53■□□□□ 0.4
Col4a6B1AVK5 Gm10060-201ENSMUST00000212002 111 ntBASIC17.53■□□□□ 0.4
Col4a6B1AVK5 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Col4a6B1AVK5 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Col4a6B1AVK5 Gfra2-202ENSMUST00000227633 1480 ntBASIC17.53■□□□□ 0.4
Col4a6B1AVK5 Tfap2a-209ENSMUST00000225180 1828 ntBASIC17.53■□□□□ 0.4
Col4a6B1AVK5 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Col4a6B1AVK5 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Col4a6B1AVK5 Gm7862-201ENSMUST00000121461 292 ntBASIC17.52■□□□□ 0.4
Col4a6B1AVK5 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Col4a6B1AVK5 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC17.52■□□□□ 0.4
Col4a6B1AVK5 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC17.52■□□□□ 0.4
Col4a6B1AVK5 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
Col4a6B1AVK5 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
Col4a6B1AVK5 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
Col4a6B1AVK5 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Col4a6B1AVK5 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
Col4a6B1AVK5 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC17.52■□□□□ 0.39
Col4a6B1AVK5 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Col4a6B1AVK5 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Col4a6B1AVK5 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Col4a6B1AVK5 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.39
Col4a6B1AVK5 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Col4a6B1AVK5 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.39
Col4a6B1AVK5 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
Col4a6B1AVK5 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
Col4a6B1AVK5 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Col4a6B1AVK5 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Col4a6B1AVK5 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Col4a6B1AVK5 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC17.51■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 31.9 ms