Protein–RNA interactions for Protein: A2AN08

Ubr4, E3 ubiquitin-protein ligase UBR4, mousemouse

Predictions only

Length 5,180 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr4A2AN08 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Ubr4A2AN08 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC9□□□□□ -0.97
Ubr4A2AN08 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Ubr4A2AN08 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Ubr4A2AN08 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Ubr4A2AN08 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC9□□□□□ -0.97
Ubr4A2AN08 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC9□□□□□ -0.97
Ubr4A2AN08 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Ubr4A2AN08 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC8.99□□□□□ -0.97
Ubr4A2AN08 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Ubr4A2AN08 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC8.99□□□□□ -0.97
Ubr4A2AN08 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
Ubr4A2AN08 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Ubr4A2AN08 1110006O24Rik-201ENSMUST00000201728 768 ntBASIC8.99□□□□□ -0.97
Ubr4A2AN08 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC8.99□□□□□ -0.97
Ubr4A2AN08 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Ubr4A2AN08 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
Ubr4A2AN08 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC8.99□□□□□ -0.97
Ubr4A2AN08 1700028E10Rik-205ENSMUST00000202024 924 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
Ubr4A2AN08 Tspo-201ENSMUST00000047419 837 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Ubr4A2AN08 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
Ubr4A2AN08 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Ubr4A2AN08 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Ubr4A2AN08 Cd99l2-204ENSMUST00000114587 973 ntAPPRIS ALT2 TSL 3 BASIC8.99□□□□□ -0.97
Ubr4A2AN08 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Ubr4A2AN08 Ifng-201ENSMUST00000068592 1208 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Ubr4A2AN08 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Ubr4A2AN08 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Ubr4A2AN08 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Ubr4A2AN08 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC8.99□□□□□ -0.97
Ubr4A2AN08 Itfg2-206ENSMUST00000203374 1394 ntAPPRIS ALT2 TSL 5 BASIC8.99□□□□□ -0.97
Ubr4A2AN08 Nt5dc2-201ENSMUST00000090212 1407 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
Ubr4A2AN08 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC8.98□□□□□ -0.97
Ubr4A2AN08 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Ubr4A2AN08 Ninj1-202ENSMUST00000120733 1321 ntTSL 5 BASIC8.98□□□□□ -0.97
Ubr4A2AN08 Gm6566-201ENSMUST00000221468 1171 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
Ubr4A2AN08 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
Ubr4A2AN08 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
Ubr4A2AN08 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC8.98□□□□□ -0.97
Ubr4A2AN08 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Ubr4A2AN08 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Ubr4A2AN08 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC8.98□□□□□ -0.97
Ubr4A2AN08 Gm10499-201ENSMUST00000174094 934 ntBASIC8.98□□□□□ -0.97
Ubr4A2AN08 Cyba-201ENSMUST00000017604 744 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Ubr4A2AN08 Gm5312-201ENSMUST00000203728 547 ntBASIC8.98□□□□□ -0.97
Ubr4A2AN08 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
Ubr4A2AN08 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Ubr4A2AN08 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC8.98□□□□□ -0.97
Ubr4A2AN08 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
Ubr4A2AN08 Rn7s1-201ENSMUST00000174924 300 ntBASIC8.98□□□□□ -0.97
Ubr4A2AN08 Rn7s2-201ENSMUST00000175032 300 ntBASIC8.98□□□□□ -0.97
Ubr4A2AN08 Gm26461-201ENSMUST00000175064 290 ntBASIC8.98□□□□□ -0.97
Ubr4A2AN08 Gm27244-201ENSMUST00000184260 380 ntTSL 5 BASIC8.98□□□□□ -0.97
Ubr4A2AN08 Gm18421-201ENSMUST00000204122 625 ntBASIC8.98□□□□□ -0.97
Ubr4A2AN08 Aprt-209ENSMUST00000213062 560 ntTSL 2 BASIC8.98□□□□□ -0.97
Ubr4A2AN08 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
Ubr4A2AN08 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Ubr4A2AN08 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Ubr4A2AN08 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Ubr4A2AN08 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC8.98□□□□□ -0.97
Ubr4A2AN08 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Ubr4A2AN08 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Ubr4A2AN08 Tnni2-206ENSMUST00000149529 768 ntAPPRIS P1 TSL 2 BASIC8.98□□□□□ -0.97
Ubr4A2AN08 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC8.98□□□□□ -0.97
Ubr4A2AN08 Gm43474-201ENSMUST00000196415 774 ntBASIC8.98□□□□□ -0.97
Ubr4A2AN08 Cyhr1-201ENSMUST00000066677 1163 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
Ubr4A2AN08 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC8.97□□□□□ -0.97
Ubr4A2AN08 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC8.97□□□□□ -0.97
Ubr4A2AN08 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC8.97□□□□□ -0.97
Ubr4A2AN08 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Ubr4A2AN08 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC8.97□□□□□ -0.97
Ubr4A2AN08 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Ubr4A2AN08 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Ubr4A2AN08 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Ubr4A2AN08 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC8.97□□□□□ -0.97
Ubr4A2AN08 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
Ubr4A2AN08 Tex30-211ENSMUST00000150911 960 ntAPPRIS P1 TSL 2 BASIC8.97□□□□□ -0.97
Ubr4A2AN08 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC8.97□□□□□ -0.97
Ubr4A2AN08 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
Ubr4A2AN08 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC8.97□□□□□ -0.97
Ubr4A2AN08 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC8.97□□□□□ -0.97
Ubr4A2AN08 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC8.97□□□□□ -0.97
Ubr4A2AN08 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC8.97□□□□□ -0.97
Ubr4A2AN08 Gm11515-201ENSMUST00000150818 701 ntTSL 2 BASIC8.97□□□□□ -0.97
Ubr4A2AN08 Gm37025-201ENSMUST00000195159 829 ntBASIC8.97□□□□□ -0.97
Ubr4A2AN08 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC8.97□□□□□ -0.97
Ubr4A2AN08 Gm12151-201ENSMUST00000121374 290 ntBASIC8.97□□□□□ -0.97
Ubr4A2AN08 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC8.97□□□□□ -0.97
Ubr4A2AN08 Eaf2-201ENSMUST00000023537 849 ntAPPRIS ALT2 TSL 5 BASIC8.97□□□□□ -0.97
Ubr4A2AN08 Crhr2-209ENSMUST00000213026 1443 ntAPPRIS P2 TSL 1 (best) BASIC8.97□□□□□ -0.97
Ubr4A2AN08 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Ubr4A2AN08 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
Ubr4A2AN08 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC8.97□□□□□ -0.97
Ubr4A2AN08 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Ubr4A2AN08 Gm45765-202ENSMUST00000212921 1313 ntTSL 5 BASIC8.97□□□□□ -0.97
Ubr4A2AN08 Fgf17-202ENSMUST00000227123 1336 ntBASIC8.97□□□□□ -0.97
Ubr4A2AN08 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC8.97□□□□□ -0.97
Ubr4A2AN08 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Ubr4A2AN08 Gm2694-202ENSMUST00000180806 1452 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
Ubr4A2AN08 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC8.97□□□□□ -0.97
Retrieved 100 of 76,532 protein–RNA pairs in 44.7 ms