Protein–RNA interactions for Protein: A0A1W2P7H6

Mindy4b-ps, MINDY lysine 48 deubiquitinase 4B, pseudogene, mousemouse

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mindy4b-psA0A1W2P7H6 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Mindy4b-psA0A1W2P7H6 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
Mindy4b-psA0A1W2P7H6 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Mindy4b-psA0A1W2P7H6 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Mindy4b-psA0A1W2P7H6 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Mindy4b-psA0A1W2P7H6 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Mindy4b-psA0A1W2P7H6 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Mindy4b-psA0A1W2P7H6 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Mindy4b-psA0A1W2P7H6 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
Mindy4b-psA0A1W2P7H6 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Mindy4b-psA0A1W2P7H6 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Mindy4b-psA0A1W2P7H6 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC18.03■□□□□ 0.48
Mindy4b-psA0A1W2P7H6 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Mindy4b-psA0A1W2P7H6 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Mindy4b-psA0A1W2P7H6 Gm43702-201ENSMUST00000198772 2546 ntBASIC18.03■□□□□ 0.48
Mindy4b-psA0A1W2P7H6 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Mindy4b-psA0A1W2P7H6 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC18.02■□□□□ 0.48
Mindy4b-psA0A1W2P7H6 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
Mindy4b-psA0A1W2P7H6 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Mindy4b-psA0A1W2P7H6 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Mindy4b-psA0A1W2P7H6 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Mindy4b-psA0A1W2P7H6 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC18.02■□□□□ 0.48
Mindy4b-psA0A1W2P7H6 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Mindy4b-psA0A1W2P7H6 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Mindy4b-psA0A1W2P7H6 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Mindy4b-psA0A1W2P7H6 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Mindy4b-psA0A1W2P7H6 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
Mindy4b-psA0A1W2P7H6 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Mindy4b-psA0A1W2P7H6 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC18.02■□□□□ 0.47
Mindy4b-psA0A1W2P7H6 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Mindy4b-psA0A1W2P7H6 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
Mindy4b-psA0A1W2P7H6 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
Mindy4b-psA0A1W2P7H6 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Mindy4b-psA0A1W2P7H6 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Mindy4b-psA0A1W2P7H6 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Mindy4b-psA0A1W2P7H6 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Mindy4b-psA0A1W2P7H6 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
Mindy4b-psA0A1W2P7H6 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC18.01■□□□□ 0.47
Mindy4b-psA0A1W2P7H6 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Mindy4b-psA0A1W2P7H6 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
Mindy4b-psA0A1W2P7H6 Gm27000-201ENSMUST00000182943 842 ntBASIC18.01■□□□□ 0.47
Mindy4b-psA0A1W2P7H6 Gm7213-201ENSMUST00000215977 950 ntBASIC18.01■□□□□ 0.47
Mindy4b-psA0A1W2P7H6 Gm18032-201ENSMUST00000222541 538 ntBASIC18.01■□□□□ 0.47
Mindy4b-psA0A1W2P7H6 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Mindy4b-psA0A1W2P7H6 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Mindy4b-psA0A1W2P7H6 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Mindy4b-psA0A1W2P7H6 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC18.01■□□□□ 0.47
Mindy4b-psA0A1W2P7H6 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Mindy4b-psA0A1W2P7H6 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Mindy4b-psA0A1W2P7H6 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Mindy4b-psA0A1W2P7H6 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC18.01■□□□□ 0.47
Mindy4b-psA0A1W2P7H6 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Mindy4b-psA0A1W2P7H6 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Mindy4b-psA0A1W2P7H6 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Mindy4b-psA0A1W2P7H6 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC18■□□□□ 0.47
Mindy4b-psA0A1W2P7H6 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Mindy4b-psA0A1W2P7H6 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Mindy4b-psA0A1W2P7H6 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC18■□□□□ 0.47
Mindy4b-psA0A1W2P7H6 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Mindy4b-psA0A1W2P7H6 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Mindy4b-psA0A1W2P7H6 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC18■□□□□ 0.47
Mindy4b-psA0A1W2P7H6 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
Mindy4b-psA0A1W2P7H6 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC18■□□□□ 0.47
Mindy4b-psA0A1W2P7H6 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC18■□□□□ 0.47
Mindy4b-psA0A1W2P7H6 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Mindy4b-psA0A1W2P7H6 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC18■□□□□ 0.47
Mindy4b-psA0A1W2P7H6 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Mindy4b-psA0A1W2P7H6 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
Mindy4b-psA0A1W2P7H6 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Mindy4b-psA0A1W2P7H6 AC154855.1-201ENSMUST00000227353 1458 ntBASIC18■□□□□ 0.47
Mindy4b-psA0A1W2P7H6 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC18■□□□□ 0.47
Mindy4b-psA0A1W2P7H6 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC18■□□□□ 0.47
Mindy4b-psA0A1W2P7H6 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Mindy4b-psA0A1W2P7H6 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Mindy4b-psA0A1W2P7H6 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
Mindy4b-psA0A1W2P7H6 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Mindy4b-psA0A1W2P7H6 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Mindy4b-psA0A1W2P7H6 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Mindy4b-psA0A1W2P7H6 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Mindy4b-psA0A1W2P7H6 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Mindy4b-psA0A1W2P7H6 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Mindy4b-psA0A1W2P7H6 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Mindy4b-psA0A1W2P7H6 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
Mindy4b-psA0A1W2P7H6 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Mindy4b-psA0A1W2P7H6 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC17.99■□□□□ 0.47
Mindy4b-psA0A1W2P7H6 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Mindy4b-psA0A1W2P7H6 Gm22697-201ENSMUST00000175194 63 ntBASIC17.99■□□□□ 0.47
Mindy4b-psA0A1W2P7H6 Mir1668-201ENSMUST00000184114 107 ntBASIC17.99■□□□□ 0.47
Mindy4b-psA0A1W2P7H6 Gm18101-201ENSMUST00000215769 548 ntBASIC17.99■□□□□ 0.47
Mindy4b-psA0A1W2P7H6 Tfap2a-209ENSMUST00000225180 1828 ntBASIC17.99■□□□□ 0.47
Mindy4b-psA0A1W2P7H6 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Mindy4b-psA0A1W2P7H6 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Mindy4b-psA0A1W2P7H6 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Mindy4b-psA0A1W2P7H6 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Mindy4b-psA0A1W2P7H6 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
Mindy4b-psA0A1W2P7H6 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Mindy4b-psA0A1W2P7H6 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC17.99■□□□□ 0.47
Mindy4b-psA0A1W2P7H6 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Mindy4b-psA0A1W2P7H6 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Mindy4b-psA0A1W2P7H6 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 40.2 ms