Protein–RNA interactions for Protein: A0A1B0GSB3

Gm3880, Predicted pseudogene 3880, mousemouse

Predictions only

Length 72 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3880A0A1B0GSB3 Prrc2a-206ENSMUST00000174805 6741 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
Gm3880A0A1B0GSB3 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
Gm3880A0A1B0GSB3 Rnf152-202ENSMUST00000172299 8406 ntAPPRIS P1 TSL 2 BASIC8.49□□□□□ -1.05
Gm3880A0A1B0GSB3 Cit-203ENSMUST00000112008 6087 ntAPPRIS ALT2 TSL 5 BASIC8.49□□□□□ -1.05
Gm3880A0A1B0GSB3 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC8.49□□□□□ -1.05
Gm3880A0A1B0GSB3 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
Gm3880A0A1B0GSB3 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC8.49□□□□□ -1.05
Gm3880A0A1B0GSB3 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC8.48□□□□□ -1.05
Gm3880A0A1B0GSB3 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
Gm3880A0A1B0GSB3 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC8.48□□□□□ -1.05
Gm3880A0A1B0GSB3 Lrp10-201ENSMUST00000022782 4228 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
Gm3880A0A1B0GSB3 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
Gm3880A0A1B0GSB3 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC8.48□□□□□ -1.05
Gm3880A0A1B0GSB3 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
Gm3880A0A1B0GSB3 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
Gm3880A0A1B0GSB3 Dnajc27-201ENSMUST00000020986 4698 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
Gm3880A0A1B0GSB3 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC8.48□□□□□ -1.05
Gm3880A0A1B0GSB3 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
Gm3880A0A1B0GSB3 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC8.48□□□□□ -1.05
Gm3880A0A1B0GSB3 Gm8109-201ENSMUST00000194076 746 ntBASIC8.48□□□□□ -1.05
Gm3880A0A1B0GSB3 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
Gm3880A0A1B0GSB3 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
Gm3880A0A1B0GSB3 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
Gm3880A0A1B0GSB3 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC8.48□□□□□ -1.05
Gm3880A0A1B0GSB3 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC8.48□□□□□ -1.05
Gm3880A0A1B0GSB3 Gm16011-201ENSMUST00000121567 2662 ntBASIC8.48□□□□□ -1.05
Gm3880A0A1B0GSB3 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
Gm3880A0A1B0GSB3 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC8.48□□□□□ -1.05
Gm3880A0A1B0GSB3 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
Gm3880A0A1B0GSB3 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC8.48□□□□□ -1.05
Gm3880A0A1B0GSB3 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
Gm3880A0A1B0GSB3 Mllt6-201ENSMUST00000044730 7274 ntAPPRIS P2 TSL 1 (best) BASIC8.48□□□□□ -1.05
Gm3880A0A1B0GSB3 Acap2-201ENSMUST00000058033 6493 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
Gm3880A0A1B0GSB3 Esr1-204ENSMUST00000105590 6339 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
Gm3880A0A1B0GSB3 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
Gm3880A0A1B0GSB3 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
Gm3880A0A1B0GSB3 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
Gm3880A0A1B0GSB3 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC8.48□□□□□ -1.05
Gm3880A0A1B0GSB3 Gm38058-201ENSMUST00000194323 4368 ntBASIC8.47□□□□□ -1.05
Gm3880A0A1B0GSB3 Adgrd2-ps-201ENSMUST00000118797 2662 ntBASIC8.47□□□□□ -1.05
Gm3880A0A1B0GSB3 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
Gm3880A0A1B0GSB3 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
Gm3880A0A1B0GSB3 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
Gm3880A0A1B0GSB3 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
Gm3880A0A1B0GSB3 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
Gm3880A0A1B0GSB3 Tbc1d16-201ENSMUST00000036113 6986 ntAPPRIS P3 TSL 1 (best) BASIC8.47□□□□□ -1.05
Gm3880A0A1B0GSB3 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC8.47□□□□□ -1.05
Gm3880A0A1B0GSB3 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
Gm3880A0A1B0GSB3 Usp20-202ENSMUST00000102849 5088 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
Gm3880A0A1B0GSB3 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
Gm3880A0A1B0GSB3 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC8.47□□□□□ -1.05
Gm3880A0A1B0GSB3 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
Gm3880A0A1B0GSB3 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC8.47□□□□□ -1.05
Gm3880A0A1B0GSB3 Plxnb2-202ENSMUST00000109331 6377 ntAPPRIS P1 TSL 5 BASIC8.47□□□□□ -1.05
Gm3880A0A1B0GSB3 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
Gm3880A0A1B0GSB3 Tmem110-201ENSMUST00000006701 3742 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
Gm3880A0A1B0GSB3 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
Gm3880A0A1B0GSB3 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC8.47□□□□□ -1.05
Gm3880A0A1B0GSB3 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
Gm3880A0A1B0GSB3 Tspan11-201ENSMUST00000032501 5188 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
Gm3880A0A1B0GSB3 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC8.47□□□□□ -1.05
Gm3880A0A1B0GSB3 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
Gm3880A0A1B0GSB3 Mdga2-201ENSMUST00000037181 9833 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
Gm3880A0A1B0GSB3 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
Gm3880A0A1B0GSB3 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC8.47□□□□□ -1.05
Gm3880A0A1B0GSB3 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC8.47□□□□□ -1.05
Gm3880A0A1B0GSB3 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC8.47□□□□□ -1.05
Gm3880A0A1B0GSB3 AC131739.1-201ENSMUST00000221692 1245 ntBASIC8.47□□□□□ -1.05
Gm3880A0A1B0GSB3 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC8.47□□□□□ -1.05
Gm3880A0A1B0GSB3 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC8.47□□□□□ -1.05
Gm3880A0A1B0GSB3 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC8.47□□□□□ -1.05
Gm3880A0A1B0GSB3 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC8.47□□□□□ -1.05
Gm3880A0A1B0GSB3 Nfasc-201ENSMUST00000043189 5072 ntAPPRIS ALT2 TSL 1 (best) BASIC8.47□□□□□ -1.05
Gm3880A0A1B0GSB3 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
Gm3880A0A1B0GSB3 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
Gm3880A0A1B0GSB3 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
Gm3880A0A1B0GSB3 Xpot-201ENSMUST00000039810 5992 ntTSL 5 BASIC8.47□□□□□ -1.05
Gm3880A0A1B0GSB3 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
Gm3880A0A1B0GSB3 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC8.47□□□□□ -1.05
Gm3880A0A1B0GSB3 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC8.47□□□□□ -1.05
Gm3880A0A1B0GSB3 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
Gm3880A0A1B0GSB3 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC8.47□□□□□ -1.05
Gm3880A0A1B0GSB3 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC8.47□□□□□ -1.05
Gm3880A0A1B0GSB3 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC8.46□□□□□ -1.05
Gm3880A0A1B0GSB3 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.05
Gm3880A0A1B0GSB3 Rgs9bp-201ENSMUST00000069912 6590 ntAPPRIS P1 BASIC8.46□□□□□ -1.05
Gm3880A0A1B0GSB3 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.05
Gm3880A0A1B0GSB3 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC8.46□□□□□ -1.05
Gm3880A0A1B0GSB3 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC8.46□□□□□ -1.05
Gm3880A0A1B0GSB3 Gata2-201ENSMUST00000015197 3571 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.05
Gm3880A0A1B0GSB3 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.05
Gm3880A0A1B0GSB3 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC8.46□□□□□ -1.05
Gm3880A0A1B0GSB3 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC8.46□□□□□ -1.05
Gm3880A0A1B0GSB3 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.05
Gm3880A0A1B0GSB3 Mesd-201ENSMUST00000094215 4492 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.05
Gm3880A0A1B0GSB3 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC8.46□□□□□ -1.05
Gm3880A0A1B0GSB3 Endov-202ENSMUST00000106244 5070 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.05
Gm3880A0A1B0GSB3 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.05
Gm3880A0A1B0GSB3 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC8.46□□□□□ -1.05
Gm3880A0A1B0GSB3 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC8.46□□□□□ -1.05
Retrieved 100 of 76,532 protein–RNA pairs in 25.5 ms