Protein–RNA interactions for Protein: A0A140T8V5

Pcna-ps2, Proliferating cell nuclear antigen, mousemouse

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcna-ps2A0A140T8V5 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Pcna-ps2A0A140T8V5 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pcna-ps2A0A140T8V5 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pcna-ps2A0A140T8V5 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
Pcna-ps2A0A140T8V5 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC17.14■□□□□ 0.33
Pcna-ps2A0A140T8V5 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pcna-ps2A0A140T8V5 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pcna-ps2A0A140T8V5 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Pcna-ps2A0A140T8V5 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pcna-ps2A0A140T8V5 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pcna-ps2A0A140T8V5 Gm11643-201ENSMUST00000119578 864 ntBASIC17.14■□□□□ 0.33
Pcna-ps2A0A140T8V5 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Pcna-ps2A0A140T8V5 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC17.14■□□□□ 0.33
Pcna-ps2A0A140T8V5 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Pcna-ps2A0A140T8V5 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pcna-ps2A0A140T8V5 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pcna-ps2A0A140T8V5 Gm10812-201ENSMUST00000099864 546 ntBASIC17.14■□□□□ 0.33
Pcna-ps2A0A140T8V5 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Pcna-ps2A0A140T8V5 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
Pcna-ps2A0A140T8V5 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pcna-ps2A0A140T8V5 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pcna-ps2A0A140T8V5 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC17.14■□□□□ 0.33
Pcna-ps2A0A140T8V5 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pcna-ps2A0A140T8V5 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC17.14■□□□□ 0.33
Pcna-ps2A0A140T8V5 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pcna-ps2A0A140T8V5 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pcna-ps2A0A140T8V5 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pcna-ps2A0A140T8V5 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pcna-ps2A0A140T8V5 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pcna-ps2A0A140T8V5 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Pcna-ps2A0A140T8V5 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pcna-ps2A0A140T8V5 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pcna-ps2A0A140T8V5 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pcna-ps2A0A140T8V5 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC17.13■□□□□ 0.33
Pcna-ps2A0A140T8V5 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Pcna-ps2A0A140T8V5 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Pcna-ps2A0A140T8V5 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pcna-ps2A0A140T8V5 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pcna-ps2A0A140T8V5 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
Pcna-ps2A0A140T8V5 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Pcna-ps2A0A140T8V5 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pcna-ps2A0A140T8V5 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pcna-ps2A0A140T8V5 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC17.13■□□□□ 0.33
Pcna-ps2A0A140T8V5 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pcna-ps2A0A140T8V5 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pcna-ps2A0A140T8V5 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pcna-ps2A0A140T8V5 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Pcna-ps2A0A140T8V5 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC17.12■□□□□ 0.33
Pcna-ps2A0A140T8V5 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Pcna-ps2A0A140T8V5 Gm45774-201ENSMUST00000211992 2665 ntBASIC17.12■□□□□ 0.33
Pcna-ps2A0A140T8V5 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Pcna-ps2A0A140T8V5 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Pcna-ps2A0A140T8V5 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pcna-ps2A0A140T8V5 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pcna-ps2A0A140T8V5 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pcna-ps2A0A140T8V5 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pcna-ps2A0A140T8V5 Ddx41-204ENSMUST00000224765 2199 ntBASIC17.12■□□□□ 0.33
Pcna-ps2A0A140T8V5 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pcna-ps2A0A140T8V5 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pcna-ps2A0A140T8V5 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC17.11■□□□□ 0.33
Pcna-ps2A0A140T8V5 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pcna-ps2A0A140T8V5 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC17.11■□□□□ 0.33
Pcna-ps2A0A140T8V5 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pcna-ps2A0A140T8V5 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC17.11■□□□□ 0.33
Pcna-ps2A0A140T8V5 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pcna-ps2A0A140T8V5 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC17.11■□□□□ 0.33
Pcna-ps2A0A140T8V5 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC17.11■□□□□ 0.33
Pcna-ps2A0A140T8V5 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pcna-ps2A0A140T8V5 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Pcna-ps2A0A140T8V5 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pcna-ps2A0A140T8V5 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pcna-ps2A0A140T8V5 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pcna-ps2A0A140T8V5 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Pcna-ps2A0A140T8V5 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pcna-ps2A0A140T8V5 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Pcna-ps2A0A140T8V5 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pcna-ps2A0A140T8V5 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Pcna-ps2A0A140T8V5 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Pcna-ps2A0A140T8V5 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pcna-ps2A0A140T8V5 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pcna-ps2A0A140T8V5 Gm26917-202ENSMUST00000192833 3329 ntBASIC17.11■□□□□ 0.33
Pcna-ps2A0A140T8V5 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pcna-ps2A0A140T8V5 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pcna-ps2A0A140T8V5 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pcna-ps2A0A140T8V5 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pcna-ps2A0A140T8V5 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Pcna-ps2A0A140T8V5 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pcna-ps2A0A140T8V5 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Pcna-ps2A0A140T8V5 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Pcna-ps2A0A140T8V5 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pcna-ps2A0A140T8V5 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pcna-ps2A0A140T8V5 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pcna-ps2A0A140T8V5 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Pcna-ps2A0A140T8V5 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC17.1■□□□□ 0.33
Pcna-ps2A0A140T8V5 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC17.1■□□□□ 0.33
Pcna-ps2A0A140T8V5 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pcna-ps2A0A140T8V5 Gm16499-203ENSMUST00000204633 2177 ntBASIC17.1■□□□□ 0.33
Pcna-ps2A0A140T8V5 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pcna-ps2A0A140T8V5 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
Pcna-ps2A0A140T8V5 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 27.2 ms