Protein–RNA interactions for Protein: A0A140T8N6

Trbv13-2, T cell receptor beta, variable 13-2 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv13-2A0A140T8N6 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trbv13-2A0A140T8N6 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Trbv13-2A0A140T8N6 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trbv13-2A0A140T8N6 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trbv13-2A0A140T8N6 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Trbv13-2A0A140T8N6 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC11.9□□□□□ -0.51
Trbv13-2A0A140T8N6 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Trbv13-2A0A140T8N6 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Trbv13-2A0A140T8N6 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trbv13-2A0A140T8N6 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trbv13-2A0A140T8N6 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trbv13-2A0A140T8N6 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trbv13-2A0A140T8N6 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Trbv13-2A0A140T8N6 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC11.89□□□□□ -0.51
Trbv13-2A0A140T8N6 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Trbv13-2A0A140T8N6 Gm16042-201ENSMUST00000204813 1247 ntBASIC11.89□□□□□ -0.51
Trbv13-2A0A140T8N6 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC11.89□□□□□ -0.51
Trbv13-2A0A140T8N6 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trbv13-2A0A140T8N6 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trbv13-2A0A140T8N6 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trbv13-2A0A140T8N6 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
Trbv13-2A0A140T8N6 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
Trbv13-2A0A140T8N6 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trbv13-2A0A140T8N6 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trbv13-2A0A140T8N6 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC11.89□□□□□ -0.51
Trbv13-2A0A140T8N6 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trbv13-2A0A140T8N6 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trbv13-2A0A140T8N6 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trbv13-2A0A140T8N6 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trbv13-2A0A140T8N6 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trbv13-2A0A140T8N6 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trbv13-2A0A140T8N6 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trbv13-2A0A140T8N6 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Trbv13-2A0A140T8N6 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trbv13-2A0A140T8N6 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trbv13-2A0A140T8N6 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trbv13-2A0A140T8N6 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trbv13-2A0A140T8N6 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trbv13-2A0A140T8N6 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Trbv13-2A0A140T8N6 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trbv13-2A0A140T8N6 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trbv13-2A0A140T8N6 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trbv13-2A0A140T8N6 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Trbv13-2A0A140T8N6 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Trbv13-2A0A140T8N6 Gm715-201ENSMUST00000117865 831 ntBASIC11.88□□□□□ -0.51
Trbv13-2A0A140T8N6 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC11.88□□□□□ -0.51
Trbv13-2A0A140T8N6 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC11.88□□□□□ -0.51
Trbv13-2A0A140T8N6 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC11.88□□□□□ -0.51
Trbv13-2A0A140T8N6 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC11.88□□□□□ -0.51
Trbv13-2A0A140T8N6 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC11.88□□□□□ -0.51
Trbv13-2A0A140T8N6 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trbv13-2A0A140T8N6 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trbv13-2A0A140T8N6 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Trbv13-2A0A140T8N6 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trbv13-2A0A140T8N6 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Trbv13-2A0A140T8N6 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trbv13-2A0A140T8N6 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trbv13-2A0A140T8N6 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trbv13-2A0A140T8N6 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trbv13-2A0A140T8N6 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC11.88□□□□□ -0.51
Trbv13-2A0A140T8N6 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC11.88□□□□□ -0.51
Trbv13-2A0A140T8N6 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC11.88□□□□□ -0.51
Trbv13-2A0A140T8N6 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC11.88□□□□□ -0.51
Trbv13-2A0A140T8N6 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Trbv13-2A0A140T8N6 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
Trbv13-2A0A140T8N6 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trbv13-2A0A140T8N6 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC11.87□□□□□ -0.51
Trbv13-2A0A140T8N6 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trbv13-2A0A140T8N6 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Trbv13-2A0A140T8N6 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trbv13-2A0A140T8N6 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trbv13-2A0A140T8N6 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC11.87□□□□□ -0.51
Trbv13-2A0A140T8N6 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
Trbv13-2A0A140T8N6 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC11.87□□□□□ -0.51
Trbv13-2A0A140T8N6 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC11.87□□□□□ -0.51
Trbv13-2A0A140T8N6 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Trbv13-2A0A140T8N6 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Trbv13-2A0A140T8N6 Timm23-208ENSMUST00000226683 750 ntBASIC11.87□□□□□ -0.51
Trbv13-2A0A140T8N6 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Trbv13-2A0A140T8N6 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trbv13-2A0A140T8N6 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC11.87□□□□□ -0.51
Trbv13-2A0A140T8N6 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC11.87□□□□□ -0.51
Trbv13-2A0A140T8N6 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
Trbv13-2A0A140T8N6 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC11.87□□□□□ -0.51
Trbv13-2A0A140T8N6 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
Trbv13-2A0A140T8N6 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Trbv13-2A0A140T8N6 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Trbv13-2A0A140T8N6 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trbv13-2A0A140T8N6 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trbv13-2A0A140T8N6 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
Trbv13-2A0A140T8N6 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC11.87□□□□□ -0.51
Trbv13-2A0A140T8N6 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trbv13-2A0A140T8N6 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trbv13-2A0A140T8N6 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trbv13-2A0A140T8N6 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trbv13-2A0A140T8N6 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trbv13-2A0A140T8N6 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trbv13-2A0A140T8N6 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trbv13-2A0A140T8N6 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trbv13-2A0A140T8N6 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC11.86□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 36.6 ms