Protein–RNA interactions for Protein: A0A0G2JG37

Trav9d-4, T cell receptor alpha variable 9D-4 (Fragment), mousemouse

Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9d-4A0A0G2JG37 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav9d-4A0A0G2JG37 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Trav9d-4A0A0G2JG37 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav9d-4A0A0G2JG37 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav9d-4A0A0G2JG37 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Trav9d-4A0A0G2JG37 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Trav9d-4A0A0G2JG37 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav9d-4A0A0G2JG37 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav9d-4A0A0G2JG37 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav9d-4A0A0G2JG37 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Trav9d-4A0A0G2JG37 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav9d-4A0A0G2JG37 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav9d-4A0A0G2JG37 Mbtps2-201ENSMUST00000058098 4797 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Trav9d-4A0A0G2JG37 Sike1-201ENSMUST00000029447 7375 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav9d-4A0A0G2JG37 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav9d-4A0A0G2JG37 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Trav9d-4A0A0G2JG37 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC11.74□□□□□ -0.53
Trav9d-4A0A0G2JG37 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Trav9d-4A0A0G2JG37 Chst11-201ENSMUST00000040110 5527 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav9d-4A0A0G2JG37 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav9d-4A0A0G2JG37 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Trav9d-4A0A0G2JG37 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC11.74□□□□□ -0.53
Trav9d-4A0A0G2JG37 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav9d-4A0A0G2JG37 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav9d-4A0A0G2JG37 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav9d-4A0A0G2JG37 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Trav9d-4A0A0G2JG37 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Trav9d-4A0A0G2JG37 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav9d-4A0A0G2JG37 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav9d-4A0A0G2JG37 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav9d-4A0A0G2JG37 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav9d-4A0A0G2JG37 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav9d-4A0A0G2JG37 Kirrel-202ENSMUST00000107618 7278 ntAPPRIS P2 TSL 5 BASIC11.74□□□□□ -0.53
Trav9d-4A0A0G2JG37 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav9d-4A0A0G2JG37 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC11.73□□□□□ -0.53
Trav9d-4A0A0G2JG37 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav9d-4A0A0G2JG37 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav9d-4A0A0G2JG37 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav9d-4A0A0G2JG37 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
Trav9d-4A0A0G2JG37 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav9d-4A0A0G2JG37 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav9d-4A0A0G2JG37 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav9d-4A0A0G2JG37 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC11.73□□□□□ -0.53
Trav9d-4A0A0G2JG37 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC11.73□□□□□ -0.53
Trav9d-4A0A0G2JG37 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Trav9d-4A0A0G2JG37 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC11.73□□□□□ -0.53
Trav9d-4A0A0G2JG37 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Trav9d-4A0A0G2JG37 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Trav9d-4A0A0G2JG37 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Trav9d-4A0A0G2JG37 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav9d-4A0A0G2JG37 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav9d-4A0A0G2JG37 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav9d-4A0A0G2JG37 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav9d-4A0A0G2JG37 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav9d-4A0A0G2JG37 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav9d-4A0A0G2JG37 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav9d-4A0A0G2JG37 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
Trav9d-4A0A0G2JG37 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav9d-4A0A0G2JG37 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav9d-4A0A0G2JG37 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav9d-4A0A0G2JG37 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav9d-4A0A0G2JG37 Dpysl3-204ENSMUST00000121805 5484 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Trav9d-4A0A0G2JG37 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Trav9d-4A0A0G2JG37 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav9d-4A0A0G2JG37 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav9d-4A0A0G2JG37 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
Trav9d-4A0A0G2JG37 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC11.72□□□□□ -0.53
Trav9d-4A0A0G2JG37 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav9d-4A0A0G2JG37 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC11.72□□□□□ -0.53
Trav9d-4A0A0G2JG37 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Trav9d-4A0A0G2JG37 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav9d-4A0A0G2JG37 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav9d-4A0A0G2JG37 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav9d-4A0A0G2JG37 Foxo3-203ENSMUST00000105502 6848 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav9d-4A0A0G2JG37 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Trav9d-4A0A0G2JG37 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Trav9d-4A0A0G2JG37 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC11.72□□□□□ -0.53
Trav9d-4A0A0G2JG37 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC11.72□□□□□ -0.53
Trav9d-4A0A0G2JG37 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
Trav9d-4A0A0G2JG37 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav9d-4A0A0G2JG37 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav9d-4A0A0G2JG37 Tmem2-201ENSMUST00000025663 6585 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav9d-4A0A0G2JG37 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav9d-4A0A0G2JG37 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav9d-4A0A0G2JG37 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
Trav9d-4A0A0G2JG37 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav9d-4A0A0G2JG37 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav9d-4A0A0G2JG37 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav9d-4A0A0G2JG37 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav9d-4A0A0G2JG37 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav9d-4A0A0G2JG37 Tmem33-204ENSMUST00000161369 6164 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav9d-4A0A0G2JG37 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav9d-4A0A0G2JG37 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trav9d-4A0A0G2JG37 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trav9d-4A0A0G2JG37 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC11.71□□□□□ -0.53
Trav9d-4A0A0G2JG37 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trav9d-4A0A0G2JG37 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trav9d-4A0A0G2JG37 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Trav9d-4A0A0G2JG37 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trav9d-4A0A0G2JG37 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 20.1 ms