Protein–RNA interactions for Protein: A0A0B4J1H4

Trbv19, T cell receptor beta, variable 19 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv19A0A0B4J1H4 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trbv19A0A0B4J1H4 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trbv19A0A0B4J1H4 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
Trbv19A0A0B4J1H4 Gm43548-201ENSMUST00000197139 2353 ntBASIC13.71□□□□□ -0.21
Trbv19A0A0B4J1H4 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Trbv19A0A0B4J1H4 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC13.71□□□□□ -0.21
Trbv19A0A0B4J1H4 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.21
Trbv19A0A0B4J1H4 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC13.71□□□□□ -0.21
Trbv19A0A0B4J1H4 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC13.71□□□□□ -0.21
Trbv19A0A0B4J1H4 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC13.71□□□□□ -0.21
Trbv19A0A0B4J1H4 Gm37856-201ENSMUST00000191634 999 ntBASIC13.71□□□□□ -0.21
Trbv19A0A0B4J1H4 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trbv19A0A0B4J1H4 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trbv19A0A0B4J1H4 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trbv19A0A0B4J1H4 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.22
Trbv19A0A0B4J1H4 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.22
Trbv19A0A0B4J1H4 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.22
Trbv19A0A0B4J1H4 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Trbv19A0A0B4J1H4 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.22
Trbv19A0A0B4J1H4 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Trbv19A0A0B4J1H4 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Trbv19A0A0B4J1H4 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trbv19A0A0B4J1H4 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Trbv19A0A0B4J1H4 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
Trbv19A0A0B4J1H4 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trbv19A0A0B4J1H4 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Trbv19A0A0B4J1H4 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
Trbv19A0A0B4J1H4 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trbv19A0A0B4J1H4 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trbv19A0A0B4J1H4 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trbv19A0A0B4J1H4 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trbv19A0A0B4J1H4 Cxcl14-202ENSMUST00000224801 1467 ntBASIC13.7□□□□□ -0.22
Trbv19A0A0B4J1H4 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC13.7□□□□□ -0.22
Trbv19A0A0B4J1H4 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trbv19A0A0B4J1H4 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trbv19A0A0B4J1H4 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC13.7□□□□□ -0.22
Trbv19A0A0B4J1H4 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC13.7□□□□□ -0.22
Trbv19A0A0B4J1H4 Gm10517-202ENSMUST00000192970 758 ntBASIC13.7□□□□□ -0.22
Trbv19A0A0B4J1H4 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC13.7□□□□□ -0.22
Trbv19A0A0B4J1H4 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trbv19A0A0B4J1H4 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trbv19A0A0B4J1H4 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trbv19A0A0B4J1H4 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trbv19A0A0B4J1H4 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trbv19A0A0B4J1H4 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Trbv19A0A0B4J1H4 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trbv19A0A0B4J1H4 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC13.7□□□□□ -0.22
Trbv19A0A0B4J1H4 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Trbv19A0A0B4J1H4 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trbv19A0A0B4J1H4 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trbv19A0A0B4J1H4 Gm11620-201ENSMUST00000118770 1845 ntBASIC13.69□□□□□ -0.22
Trbv19A0A0B4J1H4 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trbv19A0A0B4J1H4 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trbv19A0A0B4J1H4 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trbv19A0A0B4J1H4 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trbv19A0A0B4J1H4 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trbv19A0A0B4J1H4 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trbv19A0A0B4J1H4 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC13.69□□□□□ -0.22
Trbv19A0A0B4J1H4 Gm12527-201ENSMUST00000117967 564 ntBASIC13.69□□□□□ -0.22
Trbv19A0A0B4J1H4 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trbv19A0A0B4J1H4 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
Trbv19A0A0B4J1H4 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Trbv19A0A0B4J1H4 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC13.69□□□□□ -0.22
Trbv19A0A0B4J1H4 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trbv19A0A0B4J1H4 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trbv19A0A0B4J1H4 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trbv19A0A0B4J1H4 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Trbv19A0A0B4J1H4 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Trbv19A0A0B4J1H4 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trbv19A0A0B4J1H4 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trbv19A0A0B4J1H4 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC13.69□□□□□ -0.22
Trbv19A0A0B4J1H4 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trbv19A0A0B4J1H4 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Trbv19A0A0B4J1H4 Gm45774-201ENSMUST00000211992 2665 ntBASIC13.68□□□□□ -0.22
Trbv19A0A0B4J1H4 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Trbv19A0A0B4J1H4 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC13.68□□□□□ -0.22
Trbv19A0A0B4J1H4 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trbv19A0A0B4J1H4 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC13.68□□□□□ -0.22
Trbv19A0A0B4J1H4 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Trbv19A0A0B4J1H4 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Trbv19A0A0B4J1H4 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Trbv19A0A0B4J1H4 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trbv19A0A0B4J1H4 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trbv19A0A0B4J1H4 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trbv19A0A0B4J1H4 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Trbv19A0A0B4J1H4 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC13.68□□□□□ -0.22
Trbv19A0A0B4J1H4 Gm43183-201ENSMUST00000200632 547 ntBASIC13.68□□□□□ -0.22
Trbv19A0A0B4J1H4 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Trbv19A0A0B4J1H4 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trbv19A0A0B4J1H4 Gm11841-201ENSMUST00000117060 1963 ntBASIC13.68□□□□□ -0.22
Trbv19A0A0B4J1H4 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trbv19A0A0B4J1H4 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trbv19A0A0B4J1H4 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trbv19A0A0B4J1H4 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trbv19A0A0B4J1H4 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC13.67□□□□□ -0.22
Trbv19A0A0B4J1H4 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
Trbv19A0A0B4J1H4 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Trbv19A0A0B4J1H4 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trbv19A0A0B4J1H4 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trbv19A0A0B4J1H4 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 38.8 ms