Protein–RNA interactions for Protein: A0A0B4J1G9

Trbv5, T cell receptor beta, variable 5 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv5A0A0B4J1G9 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trbv5A0A0B4J1G9 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trbv5A0A0B4J1G9 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trbv5A0A0B4J1G9 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Trbv5A0A0B4J1G9 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trbv5A0A0B4J1G9 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trbv5A0A0B4J1G9 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Trbv5A0A0B4J1G9 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Trbv5A0A0B4J1G9 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trbv5A0A0B4J1G9 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Trbv5A0A0B4J1G9 AC154231.1-201ENSMUST00000220564 2175 ntBASIC13.79□□□□□ -0.2
Trbv5A0A0B4J1G9 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trbv5A0A0B4J1G9 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trbv5A0A0B4J1G9 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
Trbv5A0A0B4J1G9 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC13.79□□□□□ -0.2
Trbv5A0A0B4J1G9 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trbv5A0A0B4J1G9 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trbv5A0A0B4J1G9 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trbv5A0A0B4J1G9 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trbv5A0A0B4J1G9 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trbv5A0A0B4J1G9 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trbv5A0A0B4J1G9 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trbv5A0A0B4J1G9 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trbv5A0A0B4J1G9 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trbv5A0A0B4J1G9 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC13.78□□□□□ -0.2
Trbv5A0A0B4J1G9 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC13.78□□□□□ -0.2
Trbv5A0A0B4J1G9 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trbv5A0A0B4J1G9 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trbv5A0A0B4J1G9 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Trbv5A0A0B4J1G9 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Trbv5A0A0B4J1G9 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trbv5A0A0B4J1G9 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trbv5A0A0B4J1G9 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trbv5A0A0B4J1G9 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
Trbv5A0A0B4J1G9 Gm13146-201ENSMUST00000118508 780 ntBASIC13.78□□□□□ -0.2
Trbv5A0A0B4J1G9 Gm13534-201ENSMUST00000121169 513 ntBASIC13.78□□□□□ -0.2
Trbv5A0A0B4J1G9 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC13.78□□□□□ -0.2
Trbv5A0A0B4J1G9 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
Trbv5A0A0B4J1G9 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC13.78□□□□□ -0.2
Trbv5A0A0B4J1G9 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trbv5A0A0B4J1G9 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trbv5A0A0B4J1G9 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trbv5A0A0B4J1G9 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trbv5A0A0B4J1G9 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trbv5A0A0B4J1G9 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Trbv5A0A0B4J1G9 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trbv5A0A0B4J1G9 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trbv5A0A0B4J1G9 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trbv5A0A0B4J1G9 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trbv5A0A0B4J1G9 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Trbv5A0A0B4J1G9 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC13.77□□□□□ -0.2
Trbv5A0A0B4J1G9 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
Trbv5A0A0B4J1G9 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trbv5A0A0B4J1G9 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC13.77□□□□□ -0.21
Trbv5A0A0B4J1G9 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trbv5A0A0B4J1G9 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trbv5A0A0B4J1G9 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC13.77□□□□□ -0.21
Trbv5A0A0B4J1G9 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trbv5A0A0B4J1G9 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trbv5A0A0B4J1G9 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trbv5A0A0B4J1G9 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
Trbv5A0A0B4J1G9 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trbv5A0A0B4J1G9 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trbv5A0A0B4J1G9 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC13.77□□□□□ -0.21
Trbv5A0A0B4J1G9 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trbv5A0A0B4J1G9 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.21
Trbv5A0A0B4J1G9 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trbv5A0A0B4J1G9 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trbv5A0A0B4J1G9 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trbv5A0A0B4J1G9 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trbv5A0A0B4J1G9 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Trbv5A0A0B4J1G9 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trbv5A0A0B4J1G9 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Trbv5A0A0B4J1G9 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Trbv5A0A0B4J1G9 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC13.76□□□□□ -0.21
Trbv5A0A0B4J1G9 Gm36858-201ENSMUST00000194501 2391 ntBASIC13.76□□□□□ -0.21
Trbv5A0A0B4J1G9 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trbv5A0A0B4J1G9 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
Trbv5A0A0B4J1G9 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trbv5A0A0B4J1G9 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trbv5A0A0B4J1G9 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Trbv5A0A0B4J1G9 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Trbv5A0A0B4J1G9 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC13.76□□□□□ -0.21
Trbv5A0A0B4J1G9 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trbv5A0A0B4J1G9 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC13.76□□□□□ -0.21
Trbv5A0A0B4J1G9 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Trbv5A0A0B4J1G9 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
Trbv5A0A0B4J1G9 Gm29791-202ENSMUST00000207888 369 ntBASIC13.76□□□□□ -0.21
Trbv5A0A0B4J1G9 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC13.76□□□□□ -0.21
Trbv5A0A0B4J1G9 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC13.76□□□□□ -0.21
Trbv5A0A0B4J1G9 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trbv5A0A0B4J1G9 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trbv5A0A0B4J1G9 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Trbv5A0A0B4J1G9 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Trbv5A0A0B4J1G9 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC13.76□□□□□ -0.21
Trbv5A0A0B4J1G9 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trbv5A0A0B4J1G9 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trbv5A0A0B4J1G9 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Trbv5A0A0B4J1G9 Gm43272-201ENSMUST00000200599 1584 ntBASIC13.75□□□□□ -0.21
Trbv5A0A0B4J1G9 AC131586.2-201ENSMUST00000228370 1512 ntBASIC13.75□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 30.5 ms