Protein–RNA interactions for Protein: A0A0A6YXN5

Ighv1-43, Immunoglobulin heavy variable V1-43 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-43A0A0A6YXN5 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Ighv1-43A0A0A6YXN5 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Ighv1-43A0A0A6YXN5 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Ighv1-43A0A0A6YXN5 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
Ighv1-43A0A0A6YXN5 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Ighv1-43A0A0A6YXN5 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
Ighv1-43A0A0A6YXN5 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
Ighv1-43A0A0A6YXN5 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Ighv1-43A0A0A6YXN5 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Ighv1-43A0A0A6YXN5 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Ighv1-43A0A0A6YXN5 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Ighv1-43A0A0A6YXN5 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Ighv1-43A0A0A6YXN5 Gm37722-201ENSMUST00000193757 208 ntBASIC15.75■□□□□ 0.11
Ighv1-43A0A0A6YXN5 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Ighv1-43A0A0A6YXN5 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Ighv1-43A0A0A6YXN5 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Ighv1-43A0A0A6YXN5 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Ighv1-43A0A0A6YXN5 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC15.75■□□□□ 0.11
Ighv1-43A0A0A6YXN5 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Ighv1-43A0A0A6YXN5 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Ighv1-43A0A0A6YXN5 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Ighv1-43A0A0A6YXN5 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Ighv1-43A0A0A6YXN5 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
Ighv1-43A0A0A6YXN5 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC15.74■□□□□ 0.11
Ighv1-43A0A0A6YXN5 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Ighv1-43A0A0A6YXN5 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Ighv1-43A0A0A6YXN5 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
Ighv1-43A0A0A6YXN5 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Ighv1-43A0A0A6YXN5 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Ighv1-43A0A0A6YXN5 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC15.74■□□□□ 0.11
Ighv1-43A0A0A6YXN5 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Ighv1-43A0A0A6YXN5 Gm17808-201ENSMUST00000200859 894 ntBASIC15.74■□□□□ 0.11
Ighv1-43A0A0A6YXN5 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Ighv1-43A0A0A6YXN5 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
Ighv1-43A0A0A6YXN5 AC154471.1-201ENSMUST00000224418 436 ntBASIC15.74■□□□□ 0.11
Ighv1-43A0A0A6YXN5 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Ighv1-43A0A0A6YXN5 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Ighv1-43A0A0A6YXN5 Gm10819-201ENSMUST00000099988 561 ntBASIC15.74■□□□□ 0.11
Ighv1-43A0A0A6YXN5 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC15.74■□□□□ 0.11
Ighv1-43A0A0A6YXN5 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Ighv1-43A0A0A6YXN5 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Ighv1-43A0A0A6YXN5 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Ighv1-43A0A0A6YXN5 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Ighv1-43A0A0A6YXN5 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Ighv1-43A0A0A6YXN5 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Ighv1-43A0A0A6YXN5 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Ighv1-43A0A0A6YXN5 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Ighv1-43A0A0A6YXN5 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Ighv1-43A0A0A6YXN5 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Ighv1-43A0A0A6YXN5 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Ighv1-43A0A0A6YXN5 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC15.73■□□□□ 0.11
Ighv1-43A0A0A6YXN5 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Ighv1-43A0A0A6YXN5 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Ighv1-43A0A0A6YXN5 Gm7284-201ENSMUST00000131667 944 ntBASIC15.73■□□□□ 0.11
Ighv1-43A0A0A6YXN5 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC15.73■□□□□ 0.11
Ighv1-43A0A0A6YXN5 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC15.73■□□□□ 0.11
Ighv1-43A0A0A6YXN5 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC15.73■□□□□ 0.11
Ighv1-43A0A0A6YXN5 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC15.73■□□□□ 0.11
Ighv1-43A0A0A6YXN5 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC15.73■□□□□ 0.11
Ighv1-43A0A0A6YXN5 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
Ighv1-43A0A0A6YXN5 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC15.73■□□□□ 0.11
Ighv1-43A0A0A6YXN5 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Ighv1-43A0A0A6YXN5 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Ighv1-43A0A0A6YXN5 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Ighv1-43A0A0A6YXN5 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
Ighv1-43A0A0A6YXN5 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Ighv1-43A0A0A6YXN5 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC15.73■□□□□ 0.11
Ighv1-43A0A0A6YXN5 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Ighv1-43A0A0A6YXN5 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
Ighv1-43A0A0A6YXN5 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC15.73■□□□□ 0.11
Ighv1-43A0A0A6YXN5 Gm19439-201ENSMUST00000198195 2273 ntBASIC15.73■□□□□ 0.11
Ighv1-43A0A0A6YXN5 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Ighv1-43A0A0A6YXN5 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Ighv1-43A0A0A6YXN5 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
Ighv1-43A0A0A6YXN5 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Ighv1-43A0A0A6YXN5 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Ighv1-43A0A0A6YXN5 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC15.72■□□□□ 0.11
Ighv1-43A0A0A6YXN5 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
Ighv1-43A0A0A6YXN5 Gm45606-201ENSMUST00000209836 2795 ntBASIC15.72■□□□□ 0.11
Ighv1-43A0A0A6YXN5 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
Ighv1-43A0A0A6YXN5 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
Ighv1-43A0A0A6YXN5 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
Ighv1-43A0A0A6YXN5 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Ighv1-43A0A0A6YXN5 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Ighv1-43A0A0A6YXN5 Gm11860-201ENSMUST00000122346 1010 ntBASIC15.72■□□□□ 0.11
Ighv1-43A0A0A6YXN5 Gm27704-201ENSMUST00000185094 107 ntBASIC15.72■□□□□ 0.11
Ighv1-43A0A0A6YXN5 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC15.72■□□□□ 0.11
Ighv1-43A0A0A6YXN5 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Ighv1-43A0A0A6YXN5 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Ighv1-43A0A0A6YXN5 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Ighv1-43A0A0A6YXN5 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
Ighv1-43A0A0A6YXN5 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Ighv1-43A0A0A6YXN5 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC15.72■□□□□ 0.11
Ighv1-43A0A0A6YXN5 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC15.72■□□□□ 0.11
Ighv1-43A0A0A6YXN5 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Ighv1-43A0A0A6YXN5 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
Ighv1-43A0A0A6YXN5 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
Ighv1-43A0A0A6YXN5 Gm37194-201ENSMUST00000193092 3031 ntBASIC15.72■□□□□ 0.11
Ighv1-43A0A0A6YXN5 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Ighv1-43A0A0A6YXN5 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC15.71■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 31.3 ms