Protein–RNA interactions for Protein: A0A0A6YWV4

Trbc1, T cell receptor beta, constant region 1 (Fragment), mousemouse

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbc1A0A0A6YWV4 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trbc1A0A0A6YWV4 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trbc1A0A0A6YWV4 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
Trbc1A0A0A6YWV4 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trbc1A0A0A6YWV4 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trbc1A0A0A6YWV4 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
Trbc1A0A0A6YWV4 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trbc1A0A0A6YWV4 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trbc1A0A0A6YWV4 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trbc1A0A0A6YWV4 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trbc1A0A0A6YWV4 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC15.67■□□□□ 0.1
Trbc1A0A0A6YWV4 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trbc1A0A0A6YWV4 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trbc1A0A0A6YWV4 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
Trbc1A0A0A6YWV4 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trbc1A0A0A6YWV4 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Trbc1A0A0A6YWV4 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC15.67■□□□□ 0.1
Trbc1A0A0A6YWV4 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trbc1A0A0A6YWV4 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trbc1A0A0A6YWV4 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Trbc1A0A0A6YWV4 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC15.66■□□□□ 0.1
Trbc1A0A0A6YWV4 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC15.66■□□□□ 0.1
Trbc1A0A0A6YWV4 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trbc1A0A0A6YWV4 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Trbc1A0A0A6YWV4 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trbc1A0A0A6YWV4 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trbc1A0A0A6YWV4 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Trbc1A0A0A6YWV4 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trbc1A0A0A6YWV4 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
Trbc1A0A0A6YWV4 Gm15565-201ENSMUST00000118890 427 ntBASIC15.66■□□□□ 0.1
Trbc1A0A0A6YWV4 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trbc1A0A0A6YWV4 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trbc1A0A0A6YWV4 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC15.66■□□□□ 0.1
Trbc1A0A0A6YWV4 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trbc1A0A0A6YWV4 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC15.66■□□□□ 0.1
Trbc1A0A0A6YWV4 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Trbc1A0A0A6YWV4 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Trbc1A0A0A6YWV4 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC15.66■□□□□ 0.1
Trbc1A0A0A6YWV4 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trbc1A0A0A6YWV4 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
Trbc1A0A0A6YWV4 Dancr-204ENSMUST00000132389 2347 ntBASIC15.66■□□□□ 0.1
Trbc1A0A0A6YWV4 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC15.66■□□□□ 0.1
Trbc1A0A0A6YWV4 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Trbc1A0A0A6YWV4 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trbc1A0A0A6YWV4 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trbc1A0A0A6YWV4 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trbc1A0A0A6YWV4 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
Trbc1A0A0A6YWV4 Hivep3-201ENSMUST00000084306 2973 ntBASIC15.65■□□□□ 0.1
Trbc1A0A0A6YWV4 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
Trbc1A0A0A6YWV4 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC15.65■□□□□ 0.1
Trbc1A0A0A6YWV4 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trbc1A0A0A6YWV4 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
Trbc1A0A0A6YWV4 Gm27463-201ENSMUST00000183569 57 ntBASIC15.65■□□□□ 0.1
Trbc1A0A0A6YWV4 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trbc1A0A0A6YWV4 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC15.65■□□□□ 0.1
Trbc1A0A0A6YWV4 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trbc1A0A0A6YWV4 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trbc1A0A0A6YWV4 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC15.65■□□□□ 0.1
Trbc1A0A0A6YWV4 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC15.65■□□□□ 0.1
Trbc1A0A0A6YWV4 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
Trbc1A0A0A6YWV4 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC15.65■□□□□ 0.1
Trbc1A0A0A6YWV4 Gm10461-201ENSMUST00000202073 4786 ntBASIC15.65■□□□□ 0.1
Trbc1A0A0A6YWV4 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trbc1A0A0A6YWV4 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC15.65■□□□□ 0.1
Trbc1A0A0A6YWV4 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trbc1A0A0A6YWV4 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trbc1A0A0A6YWV4 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.1
Trbc1A0A0A6YWV4 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trbc1A0A0A6YWV4 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trbc1A0A0A6YWV4 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Trbc1A0A0A6YWV4 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trbc1A0A0A6YWV4 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trbc1A0A0A6YWV4 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trbc1A0A0A6YWV4 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC15.64■□□□□ 0.09
Trbc1A0A0A6YWV4 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Trbc1A0A0A6YWV4 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trbc1A0A0A6YWV4 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC15.64■□□□□ 0.09
Trbc1A0A0A6YWV4 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
Trbc1A0A0A6YWV4 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trbc1A0A0A6YWV4 Gm37025-201ENSMUST00000195159 829 ntBASIC15.64■□□□□ 0.09
Trbc1A0A0A6YWV4 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
Trbc1A0A0A6YWV4 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
Trbc1A0A0A6YWV4 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trbc1A0A0A6YWV4 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC15.64■□□□□ 0.09
Trbc1A0A0A6YWV4 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trbc1A0A0A6YWV4 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trbc1A0A0A6YWV4 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trbc1A0A0A6YWV4 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Trbc1A0A0A6YWV4 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
Trbc1A0A0A6YWV4 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trbc1A0A0A6YWV4 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
Trbc1A0A0A6YWV4 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trbc1A0A0A6YWV4 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
Trbc1A0A0A6YWV4 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trbc1A0A0A6YWV4 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trbc1A0A0A6YWV4 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trbc1A0A0A6YWV4 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Trbc1A0A0A6YWV4 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trbc1A0A0A6YWV4 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trbc1A0A0A6YWV4 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 46.8 ms