Protein–RNA interactions for Protein: A0A075B6C4

Trav21-dv12, T cell receptor alpha variable 21-DV12 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav21-dv12A0A075B6C4 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav21-dv12A0A075B6C4 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Trav21-dv12A0A075B6C4 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav21-dv12A0A075B6C4 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav21-dv12A0A075B6C4 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Trav21-dv12A0A075B6C4 Gm42545-201ENSMUST00000202755 922 ntBASIC13.14□□□□□ -0.31
Trav21-dv12A0A075B6C4 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav21-dv12A0A075B6C4 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav21-dv12A0A075B6C4 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Trav21-dv12A0A075B6C4 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav21-dv12A0A075B6C4 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav21-dv12A0A075B6C4 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav21-dv12A0A075B6C4 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav21-dv12A0A075B6C4 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Trav21-dv12A0A075B6C4 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Trav21-dv12A0A075B6C4 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Trav21-dv12A0A075B6C4 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav21-dv12A0A075B6C4 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav21-dv12A0A075B6C4 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Trav21-dv12A0A075B6C4 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC13.14□□□□□ -0.31
Trav21-dv12A0A075B6C4 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Trav21-dv12A0A075B6C4 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC13.14□□□□□ -0.31
Trav21-dv12A0A075B6C4 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Trav21-dv12A0A075B6C4 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav21-dv12A0A075B6C4 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
Trav21-dv12A0A075B6C4 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Trav21-dv12A0A075B6C4 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Trav21-dv12A0A075B6C4 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Trav21-dv12A0A075B6C4 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav21-dv12A0A075B6C4 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav21-dv12A0A075B6C4 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC13.13□□□□□ -0.31
Trav21-dv12A0A075B6C4 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav21-dv12A0A075B6C4 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav21-dv12A0A075B6C4 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav21-dv12A0A075B6C4 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Trav21-dv12A0A075B6C4 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC13.13□□□□□ -0.31
Trav21-dv12A0A075B6C4 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav21-dv12A0A075B6C4 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
Trav21-dv12A0A075B6C4 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
Trav21-dv12A0A075B6C4 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Trav21-dv12A0A075B6C4 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC13.13□□□□□ -0.31
Trav21-dv12A0A075B6C4 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC13.13□□□□□ -0.31
Trav21-dv12A0A075B6C4 AC166341.7-201ENSMUST00000221698 126 ntBASIC13.13□□□□□ -0.31
Trav21-dv12A0A075B6C4 Gm18025-201ENSMUST00000221733 862 ntBASIC13.13□□□□□ -0.31
Trav21-dv12A0A075B6C4 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav21-dv12A0A075B6C4 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
Trav21-dv12A0A075B6C4 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
Trav21-dv12A0A075B6C4 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC13.13□□□□□ -0.31
Trav21-dv12A0A075B6C4 Gm7292-201ENSMUST00000194706 2527 ntBASIC13.13□□□□□ -0.31
Trav21-dv12A0A075B6C4 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav21-dv12A0A075B6C4 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav21-dv12A0A075B6C4 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Trav21-dv12A0A075B6C4 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav21-dv12A0A075B6C4 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav21-dv12A0A075B6C4 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Trav21-dv12A0A075B6C4 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav21-dv12A0A075B6C4 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav21-dv12A0A075B6C4 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Trav21-dv12A0A075B6C4 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav21-dv12A0A075B6C4 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Trav21-dv12A0A075B6C4 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav21-dv12A0A075B6C4 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
Trav21-dv12A0A075B6C4 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC13.12□□□□□ -0.31
Trav21-dv12A0A075B6C4 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav21-dv12A0A075B6C4 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Trav21-dv12A0A075B6C4 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav21-dv12A0A075B6C4 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav21-dv12A0A075B6C4 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC13.12□□□□□ -0.31
Trav21-dv12A0A075B6C4 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC13.12□□□□□ -0.31
Trav21-dv12A0A075B6C4 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Trav21-dv12A0A075B6C4 Gm12382-201ENSMUST00000122005 922 ntBASIC13.12□□□□□ -0.31
Trav21-dv12A0A075B6C4 Gm18666-201ENSMUST00000190039 958 ntBASIC13.12□□□□□ -0.31
Trav21-dv12A0A075B6C4 Trmt13-210ENSMUST00000198454 880 ntBASIC13.12□□□□□ -0.31
Trav21-dv12A0A075B6C4 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav21-dv12A0A075B6C4 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav21-dv12A0A075B6C4 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav21-dv12A0A075B6C4 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
Trav21-dv12A0A075B6C4 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC13.12□□□□□ -0.31
Trav21-dv12A0A075B6C4 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav21-dv12A0A075B6C4 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC13.12□□□□□ -0.31
Trav21-dv12A0A075B6C4 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Trav21-dv12A0A075B6C4 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav21-dv12A0A075B6C4 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav21-dv12A0A075B6C4 Gm19721-201ENSMUST00000195284 1764 ntBASIC13.12□□□□□ -0.31
Trav21-dv12A0A075B6C4 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav21-dv12A0A075B6C4 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav21-dv12A0A075B6C4 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav21-dv12A0A075B6C4 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav21-dv12A0A075B6C4 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav21-dv12A0A075B6C4 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC13.11□□□□□ -0.31
Trav21-dv12A0A075B6C4 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav21-dv12A0A075B6C4 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
Trav21-dv12A0A075B6C4 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Trav21-dv12A0A075B6C4 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC13.11□□□□□ -0.31
Trav21-dv12A0A075B6C4 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Trav21-dv12A0A075B6C4 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC13.11□□□□□ -0.31
Trav21-dv12A0A075B6C4 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC13.11□□□□□ -0.31
Trav21-dv12A0A075B6C4 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC13.11□□□□□ -0.31
Trav21-dv12A0A075B6C4 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC13.11□□□□□ -0.31
Trav21-dv12A0A075B6C4 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC13.11□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 52.5 ms