Protein–RNA interactions for Protein: A0A075B6B2

Trav6n-6, T cell receptor alpha variable 6N-6 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6n-6A0A075B6B2 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav6n-6A0A075B6B2 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav6n-6A0A075B6B2 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav6n-6A0A075B6B2 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav6n-6A0A075B6B2 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav6n-6A0A075B6B2 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav6n-6A0A075B6B2 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav6n-6A0A075B6B2 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Trav6n-6A0A075B6B2 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav6n-6A0A075B6B2 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Trav6n-6A0A075B6B2 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav6n-6A0A075B6B2 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC12.75□□□□□ -0.37
Trav6n-6A0A075B6B2 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Trav6n-6A0A075B6B2 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Trav6n-6A0A075B6B2 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav6n-6A0A075B6B2 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav6n-6A0A075B6B2 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav6n-6A0A075B6B2 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav6n-6A0A075B6B2 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav6n-6A0A075B6B2 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav6n-6A0A075B6B2 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC12.74□□□□□ -0.37
Trav6n-6A0A075B6B2 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav6n-6A0A075B6B2 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav6n-6A0A075B6B2 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav6n-6A0A075B6B2 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav6n-6A0A075B6B2 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav6n-6A0A075B6B2 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Trav6n-6A0A075B6B2 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav6n-6A0A075B6B2 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav6n-6A0A075B6B2 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC12.74□□□□□ -0.37
Trav6n-6A0A075B6B2 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav6n-6A0A075B6B2 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav6n-6A0A075B6B2 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC12.74□□□□□ -0.37
Trav6n-6A0A075B6B2 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
Trav6n-6A0A075B6B2 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav6n-6A0A075B6B2 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
Trav6n-6A0A075B6B2 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav6n-6A0A075B6B2 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav6n-6A0A075B6B2 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav6n-6A0A075B6B2 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav6n-6A0A075B6B2 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav6n-6A0A075B6B2 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav6n-6A0A075B6B2 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav6n-6A0A075B6B2 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav6n-6A0A075B6B2 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav6n-6A0A075B6B2 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Trav6n-6A0A075B6B2 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC12.74□□□□□ -0.37
Trav6n-6A0A075B6B2 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Trav6n-6A0A075B6B2 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Trav6n-6A0A075B6B2 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav6n-6A0A075B6B2 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav6n-6A0A075B6B2 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav6n-6A0A075B6B2 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Trav6n-6A0A075B6B2 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav6n-6A0A075B6B2 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
Trav6n-6A0A075B6B2 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav6n-6A0A075B6B2 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC12.73□□□□□ -0.37
Trav6n-6A0A075B6B2 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav6n-6A0A075B6B2 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav6n-6A0A075B6B2 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav6n-6A0A075B6B2 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav6n-6A0A075B6B2 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav6n-6A0A075B6B2 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Trav6n-6A0A075B6B2 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Trav6n-6A0A075B6B2 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC12.73□□□□□ -0.37
Trav6n-6A0A075B6B2 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Trav6n-6A0A075B6B2 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Trav6n-6A0A075B6B2 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC12.73□□□□□ -0.37
Trav6n-6A0A075B6B2 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Trav6n-6A0A075B6B2 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav6n-6A0A075B6B2 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Trav6n-6A0A075B6B2 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav6n-6A0A075B6B2 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Trav6n-6A0A075B6B2 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav6n-6A0A075B6B2 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav6n-6A0A075B6B2 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Trav6n-6A0A075B6B2 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav6n-6A0A075B6B2 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Trav6n-6A0A075B6B2 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav6n-6A0A075B6B2 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Trav6n-6A0A075B6B2 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Trav6n-6A0A075B6B2 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav6n-6A0A075B6B2 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Trav6n-6A0A075B6B2 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav6n-6A0A075B6B2 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav6n-6A0A075B6B2 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav6n-6A0A075B6B2 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
Trav6n-6A0A075B6B2 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav6n-6A0A075B6B2 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Trav6n-6A0A075B6B2 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav6n-6A0A075B6B2 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav6n-6A0A075B6B2 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Trav6n-6A0A075B6B2 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav6n-6A0A075B6B2 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav6n-6A0A075B6B2 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Trav6n-6A0A075B6B2 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
Trav6n-6A0A075B6B2 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC12.72□□□□□ -0.37
Trav6n-6A0A075B6B2 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC12.72□□□□□ -0.37
Trav6n-6A0A075B6B2 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Trav6n-6A0A075B6B2 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 23 ms