Protein–RNA interactions for Protein: A0A075B655

Trav17, T cell receptor alpha variable 17 (Fragment), mousemouse

Predictions only

Length 113 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav17A0A075B655 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.23
Trav17A0A075B655 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.23
Trav17A0A075B655 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
Trav17A0A075B655 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Trav17A0A075B655 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav17A0A075B655 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav17A0A075B655 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav17A0A075B655 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav17A0A075B655 Gm8839-201ENSMUST00000121279 1645 ntBASIC13.58□□□□□ -0.24
Trav17A0A075B655 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav17A0A075B655 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav17A0A075B655 Gm20628-201ENSMUST00000177363 3215 ntBASIC13.58□□□□□ -0.24
Trav17A0A075B655 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Trav17A0A075B655 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Trav17A0A075B655 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC13.58□□□□□ -0.24
Trav17A0A075B655 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav17A0A075B655 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
Trav17A0A075B655 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav17A0A075B655 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav17A0A075B655 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav17A0A075B655 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Trav17A0A075B655 Gm6365-201ENSMUST00000054711 744 ntBASIC13.58□□□□□ -0.24
Trav17A0A075B655 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav17A0A075B655 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav17A0A075B655 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Trav17A0A075B655 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav17A0A075B655 Gm26596-201ENSMUST00000180464 2655 ntBASIC13.58□□□□□ -0.24
Trav17A0A075B655 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav17A0A075B655 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav17A0A075B655 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav17A0A075B655 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav17A0A075B655 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav17A0A075B655 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav17A0A075B655 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav17A0A075B655 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav17A0A075B655 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC13.57□□□□□ -0.24
Trav17A0A075B655 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav17A0A075B655 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav17A0A075B655 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav17A0A075B655 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav17A0A075B655 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Trav17A0A075B655 Gm44549-201ENSMUST00000208351 577 ntBASIC13.57□□□□□ -0.24
Trav17A0A075B655 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav17A0A075B655 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav17A0A075B655 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav17A0A075B655 Gm19721-201ENSMUST00000195284 1764 ntBASIC13.57□□□□□ -0.24
Trav17A0A075B655 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Trav17A0A075B655 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
Trav17A0A075B655 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav17A0A075B655 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav17A0A075B655 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav17A0A075B655 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav17A0A075B655 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav17A0A075B655 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
Trav17A0A075B655 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
Trav17A0A075B655 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav17A0A075B655 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Trav17A0A075B655 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav17A0A075B655 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC13.56□□□□□ -0.24
Trav17A0A075B655 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Trav17A0A075B655 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav17A0A075B655 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav17A0A075B655 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
Trav17A0A075B655 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Trav17A0A075B655 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Trav17A0A075B655 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Trav17A0A075B655 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC13.56□□□□□ -0.24
Trav17A0A075B655 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC13.56□□□□□ -0.24
Trav17A0A075B655 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav17A0A075B655 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav17A0A075B655 Gm42918-201ENSMUST00000199249 1580 ntBASIC13.56□□□□□ -0.24
Trav17A0A075B655 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav17A0A075B655 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
Trav17A0A075B655 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav17A0A075B655 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav17A0A075B655 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav17A0A075B655 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav17A0A075B655 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav17A0A075B655 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav17A0A075B655 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav17A0A075B655 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC13.56□□□□□ -0.24
Trav17A0A075B655 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav17A0A075B655 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Trav17A0A075B655 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav17A0A075B655 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav17A0A075B655 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
Trav17A0A075B655 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav17A0A075B655 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav17A0A075B655 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Trav17A0A075B655 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Trav17A0A075B655 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav17A0A075B655 Gm7290-201ENSMUST00000104990 617 ntBASIC13.55□□□□□ -0.24
Trav17A0A075B655 Gm12918-201ENSMUST00000120234 636 ntBASIC13.55□□□□□ -0.24
Trav17A0A075B655 Gm15710-201ENSMUST00000121821 636 ntBASIC13.55□□□□□ -0.24
Trav17A0A075B655 Gm6211-202ENSMUST00000167849 925 ntBASIC13.55□□□□□ -0.24
Trav17A0A075B655 Gm29241-201ENSMUST00000189260 1096 ntBASIC13.55□□□□□ -0.24
Trav17A0A075B655 Gm5075-201ENSMUST00000196916 622 ntBASIC13.55□□□□□ -0.24
Trav17A0A075B655 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC13.55□□□□□ -0.24
Trav17A0A075B655 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Trav17A0A075B655 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 53 ms