Protein–RNA interactions for Protein: A0A075B649

Trav13-2, T cell receptor alpha variable 13-2 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13-2A0A075B649 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC11.51□□□□□ -0.57
Trav13-2A0A075B649 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Trav13-2A0A075B649 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav13-2A0A075B649 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav13-2A0A075B649 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav13-2A0A075B649 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav13-2A0A075B649 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC11.51□□□□□ -0.57
Trav13-2A0A075B649 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
Trav13-2A0A075B649 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC11.51□□□□□ -0.57
Trav13-2A0A075B649 Lrrc32-203ENSMUST00000205956 4576 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
Trav13-2A0A075B649 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Trav13-2A0A075B649 Iqsec3-201ENSMUST00000046373 6840 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav13-2A0A075B649 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav13-2A0A075B649 Haglr-201ENSMUST00000100000 2085 ntBASIC11.51□□□□□ -0.57
Trav13-2A0A075B649 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav13-2A0A075B649 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav13-2A0A075B649 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav13-2A0A075B649 St6gal2-201ENSMUST00000025000 6066 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
Trav13-2A0A075B649 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
Trav13-2A0A075B649 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav13-2A0A075B649 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Trav13-2A0A075B649 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
Trav13-2A0A075B649 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
Trav13-2A0A075B649 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Trav13-2A0A075B649 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav13-2A0A075B649 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav13-2A0A075B649 Tead1-201ENSMUST00000059768 9964 ntAPPRIS P4 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav13-2A0A075B649 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
Trav13-2A0A075B649 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav13-2A0A075B649 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav13-2A0A075B649 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav13-2A0A075B649 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav13-2A0A075B649 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav13-2A0A075B649 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav13-2A0A075B649 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav13-2A0A075B649 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Trav13-2A0A075B649 Gm45412-201ENSMUST00000210217 2275 ntBASIC11.5□□□□□ -0.57
Trav13-2A0A075B649 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav13-2A0A075B649 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
Trav13-2A0A075B649 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC11.5□□□□□ -0.57
Trav13-2A0A075B649 Gm7514-201ENSMUST00000209475 934 ntBASIC11.5□□□□□ -0.57
Trav13-2A0A075B649 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav13-2A0A075B649 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC11.5□□□□□ -0.57
Trav13-2A0A075B649 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Trav13-2A0A075B649 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC11.5□□□□□ -0.57
Trav13-2A0A075B649 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav13-2A0A075B649 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav13-2A0A075B649 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC11.5□□□□□ -0.57
Trav13-2A0A075B649 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav13-2A0A075B649 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav13-2A0A075B649 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav13-2A0A075B649 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC11.5□□□□□ -0.57
Trav13-2A0A075B649 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC11.5□□□□□ -0.57
Trav13-2A0A075B649 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav13-2A0A075B649 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav13-2A0A075B649 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav13-2A0A075B649 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
Trav13-2A0A075B649 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav13-2A0A075B649 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Trav13-2A0A075B649 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav13-2A0A075B649 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Trav13-2A0A075B649 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav13-2A0A075B649 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav13-2A0A075B649 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav13-2A0A075B649 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
Trav13-2A0A075B649 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
Trav13-2A0A075B649 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav13-2A0A075B649 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
Trav13-2A0A075B649 Dmtn-201ENSMUST00000022694 5418 ntAPPRIS ALT1 TSL 5 BASIC11.49□□□□□ -0.57
Trav13-2A0A075B649 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC11.49□□□□□ -0.57
Trav13-2A0A075B649 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC11.49□□□□□ -0.57
Trav13-2A0A075B649 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav13-2A0A075B649 Nfat5-203ENSMUST00000125721 5899 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
Trav13-2A0A075B649 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Trav13-2A0A075B649 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC11.49□□□□□ -0.57
Trav13-2A0A075B649 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav13-2A0A075B649 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Trav13-2A0A075B649 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC11.49□□□□□ -0.57
Trav13-2A0A075B649 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav13-2A0A075B649 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav13-2A0A075B649 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav13-2A0A075B649 Kmt5b-206ENSMUST00000113973 6130 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
Trav13-2A0A075B649 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Trav13-2A0A075B649 AC125311.2-201ENSMUST00000227477 1940 ntBASIC11.48□□□□□ -0.57
Trav13-2A0A075B649 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav13-2A0A075B649 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Trav13-2A0A075B649 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
Trav13-2A0A075B649 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC11.48□□□□□ -0.57
Trav13-2A0A075B649 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav13-2A0A075B649 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav13-2A0A075B649 Adamts2-201ENSMUST00000040523 7266 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav13-2A0A075B649 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC11.48□□□□□ -0.57
Trav13-2A0A075B649 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav13-2A0A075B649 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav13-2A0A075B649 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC11.48□□□□□ -0.57
Trav13-2A0A075B649 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Trav13-2A0A075B649 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC11.48□□□□□ -0.57
Trav13-2A0A075B649 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC11.48□□□□□ -0.57
Trav13-2A0A075B649 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC11.48□□□□□ -0.57
Trav13-2A0A075B649 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC11.48□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 29.9 ms