Protein–RNA interactions for Protein: A0A075B624

Trav15d-1-dv6d-1, T cell receptor alpha variable 15D-1-DV6D-1 (Fragment), mousemouse

Predictions only

Length 124 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15d-1-dv6d-1A0A075B624 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav15d-1-dv6d-1A0A075B624 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav15d-1-dv6d-1A0A075B624 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav15d-1-dv6d-1A0A075B624 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav15d-1-dv6d-1A0A075B624 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav15d-1-dv6d-1A0A075B624 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav15d-1-dv6d-1A0A075B624 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Trav15d-1-dv6d-1A0A075B624 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Trav15d-1-dv6d-1A0A075B624 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
Trav15d-1-dv6d-1A0A075B624 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC14.54□□□□□ -0.08
Trav15d-1-dv6d-1A0A075B624 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav15d-1-dv6d-1A0A075B624 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Trav15d-1-dv6d-1A0A075B624 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC14.54□□□□□ -0.08
Trav15d-1-dv6d-1A0A075B624 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
Trav15d-1-dv6d-1A0A075B624 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav15d-1-dv6d-1A0A075B624 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
Trav15d-1-dv6d-1A0A075B624 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav15d-1-dv6d-1A0A075B624 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Trav15d-1-dv6d-1A0A075B624 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav15d-1-dv6d-1A0A075B624 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC14.53□□□□□ -0.08
Trav15d-1-dv6d-1A0A075B624 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC14.53□□□□□ -0.08
Trav15d-1-dv6d-1A0A075B624 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav15d-1-dv6d-1A0A075B624 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav15d-1-dv6d-1A0A075B624 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
Trav15d-1-dv6d-1A0A075B624 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav15d-1-dv6d-1A0A075B624 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav15d-1-dv6d-1A0A075B624 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav15d-1-dv6d-1A0A075B624 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav15d-1-dv6d-1A0A075B624 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav15d-1-dv6d-1A0A075B624 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav15d-1-dv6d-1A0A075B624 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Trav15d-1-dv6d-1A0A075B624 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC14.53□□□□□ -0.08
Trav15d-1-dv6d-1A0A075B624 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC14.53□□□□□ -0.08
Trav15d-1-dv6d-1A0A075B624 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav15d-1-dv6d-1A0A075B624 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav15d-1-dv6d-1A0A075B624 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
Trav15d-1-dv6d-1A0A075B624 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC14.53□□□□□ -0.08
Trav15d-1-dv6d-1A0A075B624 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav15d-1-dv6d-1A0A075B624 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav15d-1-dv6d-1A0A075B624 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav15d-1-dv6d-1A0A075B624 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav15d-1-dv6d-1A0A075B624 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Trav15d-1-dv6d-1A0A075B624 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Trav15d-1-dv6d-1A0A075B624 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.08
Trav15d-1-dv6d-1A0A075B624 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Trav15d-1-dv6d-1A0A075B624 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Trav15d-1-dv6d-1A0A075B624 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Trav15d-1-dv6d-1A0A075B624 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.08
Trav15d-1-dv6d-1A0A075B624 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Trav15d-1-dv6d-1A0A075B624 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Trav15d-1-dv6d-1A0A075B624 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC14.52□□□□□ -0.08
Trav15d-1-dv6d-1A0A075B624 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
Trav15d-1-dv6d-1A0A075B624 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC14.52□□□□□ -0.08
Trav15d-1-dv6d-1A0A075B624 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trav15d-1-dv6d-1A0A075B624 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trav15d-1-dv6d-1A0A075B624 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trav15d-1-dv6d-1A0A075B624 Gm11927-201ENSMUST00000118472 759 ntBASIC14.52□□□□□ -0.09
Trav15d-1-dv6d-1A0A075B624 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Trav15d-1-dv6d-1A0A075B624 Mir6349-201ENSMUST00000184059 97 ntBASIC14.52□□□□□ -0.09
Trav15d-1-dv6d-1A0A075B624 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Trav15d-1-dv6d-1A0A075B624 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trav15d-1-dv6d-1A0A075B624 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trav15d-1-dv6d-1A0A075B624 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trav15d-1-dv6d-1A0A075B624 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trav15d-1-dv6d-1A0A075B624 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Trav15d-1-dv6d-1A0A075B624 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trav15d-1-dv6d-1A0A075B624 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trav15d-1-dv6d-1A0A075B624 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Trav15d-1-dv6d-1A0A075B624 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Trav15d-1-dv6d-1A0A075B624 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav15d-1-dv6d-1A0A075B624 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav15d-1-dv6d-1A0A075B624 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav15d-1-dv6d-1A0A075B624 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav15d-1-dv6d-1A0A075B624 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav15d-1-dv6d-1A0A075B624 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav15d-1-dv6d-1A0A075B624 Gm37166-201ENSMUST00000195473 2474 ntBASIC14.51□□□□□ -0.09
Trav15d-1-dv6d-1A0A075B624 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC14.51□□□□□ -0.09
Trav15d-1-dv6d-1A0A075B624 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav15d-1-dv6d-1A0A075B624 Gm15847-201ENSMUST00000121417 1065 ntBASIC14.51□□□□□ -0.09
Trav15d-1-dv6d-1A0A075B624 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC14.51□□□□□ -0.09
Trav15d-1-dv6d-1A0A075B624 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav15d-1-dv6d-1A0A075B624 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav15d-1-dv6d-1A0A075B624 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Trav15d-1-dv6d-1A0A075B624 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC14.51□□□□□ -0.09
Trav15d-1-dv6d-1A0A075B624 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav15d-1-dv6d-1A0A075B624 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav15d-1-dv6d-1A0A075B624 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav15d-1-dv6d-1A0A075B624 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav15d-1-dv6d-1A0A075B624 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
Trav15d-1-dv6d-1A0A075B624 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav15d-1-dv6d-1A0A075B624 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav15d-1-dv6d-1A0A075B624 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Trav15d-1-dv6d-1A0A075B624 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav15d-1-dv6d-1A0A075B624 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav15d-1-dv6d-1A0A075B624 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Trav15d-1-dv6d-1A0A075B624 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav15d-1-dv6d-1A0A075B624 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav15d-1-dv6d-1A0A075B624 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC14.5□□□□□ -0.09
Trav15d-1-dv6d-1A0A075B624 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav15d-1-dv6d-1A0A075B624 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 44.2 ms