Protein–RNA interactions for Protein: A0A075B603

Trav6-6, T cell receptor alpha variable 6-6 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-6A0A075B603 Gm15710-201ENSMUST00000121821 636 ntBASIC12.75□□□□□ -0.37
Trav6-6A0A075B603 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Trav6-6A0A075B603 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav6-6A0A075B603 Gm5075-201ENSMUST00000196916 622 ntBASIC12.75□□□□□ -0.37
Trav6-6A0A075B603 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav6-6A0A075B603 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav6-6A0A075B603 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
Trav6-6A0A075B603 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav6-6A0A075B603 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav6-6A0A075B603 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav6-6A0A075B603 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav6-6A0A075B603 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav6-6A0A075B603 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC12.75□□□□□ -0.37
Trav6-6A0A075B603 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC12.75□□□□□ -0.37
Trav6-6A0A075B603 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Trav6-6A0A075B603 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav6-6A0A075B603 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav6-6A0A075B603 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC12.75□□□□□ -0.37
Trav6-6A0A075B603 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav6-6A0A075B603 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC12.75□□□□□ -0.37
Trav6-6A0A075B603 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Trav6-6A0A075B603 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav6-6A0A075B603 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Trav6-6A0A075B603 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav6-6A0A075B603 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav6-6A0A075B603 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav6-6A0A075B603 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav6-6A0A075B603 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav6-6A0A075B603 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
Trav6-6A0A075B603 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav6-6A0A075B603 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC12.74□□□□□ -0.37
Trav6-6A0A075B603 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC12.74□□□□□ -0.37
Trav6-6A0A075B603 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Trav6-6A0A075B603 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Trav6-6A0A075B603 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC12.74□□□□□ -0.37
Trav6-6A0A075B603 Gm6365-201ENSMUST00000054711 744 ntBASIC12.74□□□□□ -0.37
Trav6-6A0A075B603 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav6-6A0A075B603 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav6-6A0A075B603 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav6-6A0A075B603 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC12.74□□□□□ -0.37
Trav6-6A0A075B603 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Trav6-6A0A075B603 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav6-6A0A075B603 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav6-6A0A075B603 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav6-6A0A075B603 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav6-6A0A075B603 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav6-6A0A075B603 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav6-6A0A075B603 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav6-6A0A075B603 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav6-6A0A075B603 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Trav6-6A0A075B603 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Trav6-6A0A075B603 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav6-6A0A075B603 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
Trav6-6A0A075B603 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Trav6-6A0A075B603 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav6-6A0A075B603 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav6-6A0A075B603 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Trav6-6A0A075B603 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav6-6A0A075B603 Gm13509-201ENSMUST00000119733 1308 ntBASIC12.73□□□□□ -0.37
Trav6-6A0A075B603 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Trav6-6A0A075B603 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC12.73□□□□□ -0.37
Trav6-6A0A075B603 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC12.73□□□□□ -0.37
Trav6-6A0A075B603 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav6-6A0A075B603 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav6-6A0A075B603 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav6-6A0A075B603 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav6-6A0A075B603 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav6-6A0A075B603 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC12.73□□□□□ -0.37
Trav6-6A0A075B603 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Trav6-6A0A075B603 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Trav6-6A0A075B603 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Trav6-6A0A075B603 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav6-6A0A075B603 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav6-6A0A075B603 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
Trav6-6A0A075B603 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Trav6-6A0A075B603 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav6-6A0A075B603 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Trav6-6A0A075B603 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav6-6A0A075B603 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav6-6A0A075B603 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Trav6-6A0A075B603 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav6-6A0A075B603 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Trav6-6A0A075B603 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC12.72□□□□□ -0.37
Trav6-6A0A075B603 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav6-6A0A075B603 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav6-6A0A075B603 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav6-6A0A075B603 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
Trav6-6A0A075B603 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC12.72□□□□□ -0.37
Trav6-6A0A075B603 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Trav6-6A0A075B603 Gm18284-201ENSMUST00000172604 624 ntBASIC12.72□□□□□ -0.37
Trav6-6A0A075B603 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Trav6-6A0A075B603 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav6-6A0A075B603 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Trav6-6A0A075B603 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav6-6A0A075B603 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav6-6A0A075B603 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav6-6A0A075B603 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Trav6-6A0A075B603 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav6-6A0A075B603 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Trav6-6A0A075B603 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 22.8 ms