Protein–RNA interactions for Protein: A0A075B5W3

Ighv1-53, Immunoglobulin heavy variable 1-53 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-53A0A075B5W3 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
Ighv1-53A0A075B5W3 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Ighv1-53A0A075B5W3 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ighv1-53A0A075B5W3 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
Ighv1-53A0A075B5W3 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ighv1-53A0A075B5W3 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ighv1-53A0A075B5W3 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ighv1-53A0A075B5W3 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Ighv1-53A0A075B5W3 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ighv1-53A0A075B5W3 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ighv1-53A0A075B5W3 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ighv1-53A0A075B5W3 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC12.85□□□□□ -0.35
Ighv1-53A0A075B5W3 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC12.85□□□□□ -0.35
Ighv1-53A0A075B5W3 Gm12527-201ENSMUST00000117967 564 ntBASIC12.85□□□□□ -0.35
Ighv1-53A0A075B5W3 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC12.85□□□□□ -0.35
Ighv1-53A0A075B5W3 Gm15378-201ENSMUST00000121894 207 ntBASIC12.85□□□□□ -0.35
Ighv1-53A0A075B5W3 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Ighv1-53A0A075B5W3 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ighv1-53A0A075B5W3 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
Ighv1-53A0A075B5W3 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Ighv1-53A0A075B5W3 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC12.85□□□□□ -0.35
Ighv1-53A0A075B5W3 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Ighv1-53A0A075B5W3 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ighv1-53A0A075B5W3 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC12.85□□□□□ -0.35
Ighv1-53A0A075B5W3 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Ighv1-53A0A075B5W3 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ighv1-53A0A075B5W3 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ighv1-53A0A075B5W3 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ighv1-53A0A075B5W3 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Ighv1-53A0A075B5W3 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
Ighv1-53A0A075B5W3 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ighv1-53A0A075B5W3 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ighv1-53A0A075B5W3 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ighv1-53A0A075B5W3 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
Ighv1-53A0A075B5W3 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Ighv1-53A0A075B5W3 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ighv1-53A0A075B5W3 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ighv1-53A0A075B5W3 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ighv1-53A0A075B5W3 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC12.84□□□□□ -0.35
Ighv1-53A0A075B5W3 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ighv1-53A0A075B5W3 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ighv1-53A0A075B5W3 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
Ighv1-53A0A075B5W3 Gm5643-201ENSMUST00000117081 966 ntBASIC12.84□□□□□ -0.35
Ighv1-53A0A075B5W3 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ighv1-53A0A075B5W3 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ighv1-53A0A075B5W3 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ighv1-53A0A075B5W3 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ighv1-53A0A075B5W3 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ighv1-53A0A075B5W3 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ighv1-53A0A075B5W3 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ighv1-53A0A075B5W3 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ighv1-53A0A075B5W3 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ighv1-53A0A075B5W3 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ighv1-53A0A075B5W3 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ighv1-53A0A075B5W3 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.35
Ighv1-53A0A075B5W3 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC12.83□□□□□ -0.35
Ighv1-53A0A075B5W3 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC12.83□□□□□ -0.35
Ighv1-53A0A075B5W3 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Ighv1-53A0A075B5W3 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Ighv1-53A0A075B5W3 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ighv1-53A0A075B5W3 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ighv1-53A0A075B5W3 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Ighv1-53A0A075B5W3 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ighv1-53A0A075B5W3 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ighv1-53A0A075B5W3 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ighv1-53A0A075B5W3 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC12.83□□□□□ -0.36
Ighv1-53A0A075B5W3 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC12.83□□□□□ -0.36
Ighv1-53A0A075B5W3 Gm44878-201ENSMUST00000205812 1295 ntBASIC12.83□□□□□ -0.36
Ighv1-53A0A075B5W3 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ighv1-53A0A075B5W3 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ighv1-53A0A075B5W3 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Ighv1-53A0A075B5W3 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ighv1-53A0A075B5W3 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.36
Ighv1-53A0A075B5W3 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ighv1-53A0A075B5W3 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Ighv1-53A0A075B5W3 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ighv1-53A0A075B5W3 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ighv1-53A0A075B5W3 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC12.83□□□□□ -0.36
Ighv1-53A0A075B5W3 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
Ighv1-53A0A075B5W3 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ighv1-53A0A075B5W3 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Ighv1-53A0A075B5W3 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ighv1-53A0A075B5W3 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC12.82□□□□□ -0.36
Ighv1-53A0A075B5W3 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ighv1-53A0A075B5W3 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ighv1-53A0A075B5W3 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Ighv1-53A0A075B5W3 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Ighv1-53A0A075B5W3 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Ighv1-53A0A075B5W3 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ighv1-53A0A075B5W3 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ighv1-53A0A075B5W3 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ighv1-53A0A075B5W3 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ighv1-53A0A075B5W3 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC12.82□□□□□ -0.36
Ighv1-53A0A075B5W3 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ighv1-53A0A075B5W3 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ighv1-53A0A075B5W3 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Ighv1-53A0A075B5W3 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ighv1-53A0A075B5W3 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Ighv1-53A0A075B5W3 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Ighv1-53A0A075B5W3 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 19.2 ms