Protein–RNA interactions for Protein: A0A075B5I2

Trbv4, T cell receptor beta, variable 10 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv4A0A075B5I2 Gm13181-201ENSMUST00000120117 1069 ntBASIC17.1■□□□□ 0.33
Trbv4A0A075B5I2 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Trbv4A0A075B5I2 AC156016.1-201ENSMUST00000227190 1035 ntBASIC17.1■□□□□ 0.33
Trbv4A0A075B5I2 Otx2os1-204ENSMUST00000227221 751 ntBASIC17.1■□□□□ 0.33
Trbv4A0A075B5I2 Odf3b-204ENSMUST00000227834 930 ntBASIC17.1■□□□□ 0.33
Trbv4A0A075B5I2 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trbv4A0A075B5I2 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trbv4A0A075B5I2 Gm10812-201ENSMUST00000099864 546 ntBASIC17.1■□□□□ 0.33
Trbv4A0A075B5I2 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Trbv4A0A075B5I2 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trbv4A0A075B5I2 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trbv4A0A075B5I2 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trbv4A0A075B5I2 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
Trbv4A0A075B5I2 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Trbv4A0A075B5I2 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Trbv4A0A075B5I2 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC17.09■□□□□ 0.33
Trbv4A0A075B5I2 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC17.09■□□□□ 0.33
Trbv4A0A075B5I2 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC17.09■□□□□ 0.33
Trbv4A0A075B5I2 AC120002.2-201ENSMUST00000220205 773 ntBASIC17.09■□□□□ 0.33
Trbv4A0A075B5I2 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trbv4A0A075B5I2 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Trbv4A0A075B5I2 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC17.09■□□□□ 0.33
Trbv4A0A075B5I2 AL590614.2-201ENSMUST00000225374 1937 ntBASIC17.09■□□□□ 0.33
Trbv4A0A075B5I2 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trbv4A0A075B5I2 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trbv4A0A075B5I2 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Trbv4A0A075B5I2 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trbv4A0A075B5I2 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trbv4A0A075B5I2 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trbv4A0A075B5I2 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Trbv4A0A075B5I2 Gm45774-201ENSMUST00000211992 2665 ntBASIC17.08■□□□□ 0.33
Trbv4A0A075B5I2 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Trbv4A0A075B5I2 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Trbv4A0A075B5I2 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Trbv4A0A075B5I2 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Trbv4A0A075B5I2 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC17.08■□□□□ 0.32
Trbv4A0A075B5I2 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Trbv4A0A075B5I2 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC17.08■□□□□ 0.32
Trbv4A0A075B5I2 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC17.08■□□□□ 0.32
Trbv4A0A075B5I2 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Trbv4A0A075B5I2 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC17.08■□□□□ 0.32
Trbv4A0A075B5I2 Gm27000-201ENSMUST00000182943 842 ntBASIC17.08■□□□□ 0.32
Trbv4A0A075B5I2 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC17.08■□□□□ 0.32
Trbv4A0A075B5I2 Gm3375-201ENSMUST00000203929 796 ntBASIC17.08■□□□□ 0.32
Trbv4A0A075B5I2 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
Trbv4A0A075B5I2 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Trbv4A0A075B5I2 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Trbv4A0A075B5I2 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Trbv4A0A075B5I2 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Trbv4A0A075B5I2 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Trbv4A0A075B5I2 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trbv4A0A075B5I2 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Trbv4A0A075B5I2 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trbv4A0A075B5I2 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trbv4A0A075B5I2 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
Trbv4A0A075B5I2 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trbv4A0A075B5I2 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trbv4A0A075B5I2 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC17.07■□□□□ 0.32
Trbv4A0A075B5I2 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Trbv4A0A075B5I2 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC17.07■□□□□ 0.32
Trbv4A0A075B5I2 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Trbv4A0A075B5I2 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC17.07■□□□□ 0.32
Trbv4A0A075B5I2 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Trbv4A0A075B5I2 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
Trbv4A0A075B5I2 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Trbv4A0A075B5I2 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trbv4A0A075B5I2 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trbv4A0A075B5I2 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trbv4A0A075B5I2 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trbv4A0A075B5I2 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Trbv4A0A075B5I2 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trbv4A0A075B5I2 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC17.06■□□□□ 0.32
Trbv4A0A075B5I2 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC17.06■□□□□ 0.32
Trbv4A0A075B5I2 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trbv4A0A075B5I2 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trbv4A0A075B5I2 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trbv4A0A075B5I2 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trbv4A0A075B5I2 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Trbv4A0A075B5I2 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trbv4A0A075B5I2 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trbv4A0A075B5I2 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trbv4A0A075B5I2 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trbv4A0A075B5I2 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Trbv4A0A075B5I2 Gm21814-202ENSMUST00000203277 873 ntBASIC17.06■□□□□ 0.32
Trbv4A0A075B5I2 Gm7791-201ENSMUST00000219066 539 ntBASIC17.06■□□□□ 0.32
Trbv4A0A075B5I2 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trbv4A0A075B5I2 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trbv4A0A075B5I2 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trbv4A0A075B5I2 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trbv4A0A075B5I2 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Trbv4A0A075B5I2 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trbv4A0A075B5I2 Gm8839-201ENSMUST00000121279 1645 ntBASIC17.06■□□□□ 0.32
Trbv4A0A075B5I2 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC17.06■□□□□ 0.32
Trbv4A0A075B5I2 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trbv4A0A075B5I2 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trbv4A0A075B5I2 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trbv4A0A075B5I2 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Trbv4A0A075B5I2 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
Trbv4A0A075B5I2 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trbv4A0A075B5I2 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 29 ms