Protein–RNA interactions for Protein: Q8CII8

Syne4, Nesprin-4, mousemouse

Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syne4Q8CII8 Gm27648-201ENSMUST00000184315 107 ntBASIC3.18□□□□□ -1.9
Syne4Q8CII8 Gm27700-201ENSMUST00000185003 81 ntBASIC3.18□□□□□ -1.9
Syne4Q8CII8 Gm5329-201ENSMUST00000186898 463 ntBASIC3.18□□□□□ -1.9
Syne4Q8CII8 1700029M03Rik-201ENSMUST00000187300 444 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
Syne4Q8CII8 Gm28881-201ENSMUST00000187710 470 ntTSL 3 BASIC3.18□□□□□ -1.9
Syne4Q8CII8 Mir496a-201ENSMUST00000093627 79 ntBASIC3.18□□□□□ -1.9
Syne4Q8CII8 Gm26327-201ENSMUST00000093724 111 ntBASIC3.18□□□□□ -1.9
Syne4Q8CII8 Pcdh11x-206ENSMUST00000192677 9097 ntAPPRIS ALT2 TSL 5 BASIC3.18□□□□□ -1.9
Syne4Q8CII8 Wnk3-201ENSMUST00000096285 8551 ntAPPRIS ALT2 TSL 5 BASIC3.18□□□□□ -1.9
Syne4Q8CII8 Olfr748-202ENSMUST00000213101 3632 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
Syne4Q8CII8 Cp-202ENSMUST00000091309 4029 ntAPPRIS P3 TSL 1 (best) BASIC3.17□□□□□ -1.9
Syne4Q8CII8 Ctdspl2-202ENSMUST00000110572 4160 ntTSL 5 BASIC3.17□□□□□ -1.9
Syne4Q8CII8 A330044P14Rik-201ENSMUST00000176108 2706 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
Syne4Q8CII8 Gm15272-201ENSMUST00000120865 233 ntBASIC3.17□□□□□ -1.9
Syne4Q8CII8 Gm24635-201ENSMUST00000122712 128 ntBASIC3.17□□□□□ -1.9
Syne4Q8CII8 Gm22654-201ENSMUST00000157874 105 ntBASIC3.17□□□□□ -1.9
Syne4Q8CII8 Gm21893-201ENSMUST00000179119 397 ntBASIC3.17□□□□□ -1.9
Syne4Q8CII8 Gm28825-201ENSMUST00000186233 238 ntBASIC3.17□□□□□ -1.9
Syne4Q8CII8 Gm31925-201ENSMUST00000193561 600 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
Syne4Q8CII8 Trav5d-2-201ENSMUST00000196107 275 ntBASIC3.17□□□□□ -1.9
Syne4Q8CII8 Trav5n-2-201ENSMUST00000197136 275 ntBASIC3.17□□□□□ -1.9
Syne4Q8CII8 Gm44419-201ENSMUST00000203338 229 ntBASIC3.17□□□□□ -1.9
Syne4Q8CII8 Gm35386-201ENSMUST00000204603 629 ntTSL 3 BASIC3.17□□□□□ -1.9
Syne4Q8CII8 Gm44877-201ENSMUST00000206485 274 ntTSL 5 BASIC3.17□□□□□ -1.9
Syne4Q8CII8 Gm45013-201ENSMUST00000206883 178 ntBASIC3.17□□□□□ -1.9
Syne4Q8CII8 AC123803.1-201ENSMUST00000216093 189 ntBASIC3.17□□□□□ -1.9
Syne4Q8CII8 Defb21-201ENSMUST00000070722 427 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
Syne4Q8CII8 Gm22622-201ENSMUST00000082870 129 ntBASIC3.17□□□□□ -1.9
Syne4Q8CII8 Gm45662-201ENSMUST00000210054 2098 ntBASIC3.16□□□□□ -1.9
Syne4Q8CII8 Vmn1r19-201ENSMUST00000089830 2255 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
Syne4Q8CII8 Vmn1r-ps125-201ENSMUST00000117767 290 ntBASIC3.16□□□□□ -1.9
Syne4Q8CII8 Gm14837-201ENSMUST00000119688 206 ntBASIC3.16□□□□□ -1.9
Syne4Q8CII8 Gm14069-201ENSMUST00000120815 229 ntBASIC3.16□□□□□ -1.9
Syne4Q8CII8 Gm15205-201ENSMUST00000129329 632 ntTSL 5 BASIC3.16□□□□□ -1.9
Syne4Q8CII8 Gm23829-201ENSMUST00000157392 270 ntBASIC3.16□□□□□ -1.9
Syne4Q8CII8 Gm24291-201ENSMUST00000157633 162 ntBASIC3.16□□□□□ -1.9
Syne4Q8CII8 Gm22101-201ENSMUST00000157928 103 ntBASIC3.16□□□□□ -1.9
Syne4Q8CII8 Gm24225-201ENSMUST00000158825 98 ntBASIC3.16□□□□□ -1.9
Syne4Q8CII8 Gm22308-201ENSMUST00000177609 107 ntBASIC3.16□□□□□ -1.9
Syne4Q8CII8 Mir6402-201ENSMUST00000183406 80 ntBASIC3.16□□□□□ -1.9
Syne4Q8CII8 Gm43739-201ENSMUST00000198294 307 ntBASIC3.16□□□□□ -1.9
Syne4Q8CII8 Mir378a-201ENSMUST00000198300 66 ntBASIC3.16□□□□□ -1.9
Syne4Q8CII8 CT009718.1-201ENSMUST00000220784 395 ntTSL 2 BASIC3.16□□□□□ -1.9
Syne4Q8CII8 Gm22997-201ENSMUST00000082845 107 ntBASIC3.16□□□□□ -1.9
Syne4Q8CII8 Olfr1135-202ENSMUST00000213835 2648 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
Syne4Q8CII8 Olfr1457-204ENSMUST00000215229 2538 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
Syne4Q8CII8 Olfr918-202ENSMUST00000215461 3783 ntAPPRIS ALT2 TSL 5 BASIC3.15□□□□□ -1.9
Syne4Q8CII8 Zfp711-201ENSMUST00000071814 3817 ntAPPRIS ALT2 TSL 5 BASIC3.15□□□□□ -1.9
Syne4Q8CII8 Arhgap5-202ENSMUST00000217820 2332 ntTSL 5 BASIC3.15□□□□□ -1.9
Syne4Q8CII8 Cyp3a41a-201ENSMUST00000094111 2060 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.9
Syne4Q8CII8 Olfr1107-202ENSMUST00000214049 4388 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.91
Syne4Q8CII8 Mir682-201ENSMUST00000102281 96 ntBASIC3.15□□□□□ -1.91
Syne4Q8CII8 Gm24338-201ENSMUST00000104205 127 ntBASIC3.15□□□□□ -1.91
Syne4Q8CII8 Scgb1b24-201ENSMUST00000108087 279 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
Syne4Q8CII8 Gm15282-201ENSMUST00000117707 300 ntBASIC3.15□□□□□ -1.91
Syne4Q8CII8 Gm15183-201ENSMUST00000118933 348 ntBASIC3.15□□□□□ -1.91
Syne4Q8CII8 Gm12924-201ENSMUST00000121747 318 ntBASIC3.15□□□□□ -1.91
Syne4Q8CII8 Gm12785-201ENSMUST00000122052 172 ntBASIC3.15□□□□□ -1.91
Syne4Q8CII8 Gm26256-201ENSMUST00000122499 186 ntBASIC3.15□□□□□ -1.91
Syne4Q8CII8 Gm22389-201ENSMUST00000158193 301 ntBASIC3.15□□□□□ -1.91
Syne4Q8CII8 Gm23262-201ENSMUST00000158323 168 ntBASIC3.15□□□□□ -1.91
Syne4Q8CII8 Mir5624-201ENSMUST00000176635 61 ntBASIC3.15□□□□□ -1.91
Syne4Q8CII8 Mir6370-201ENSMUST00000183510 120 ntBASIC3.15□□□□□ -1.91
Syne4Q8CII8 Gm27470-201ENSMUST00000184070 210 ntBASIC3.15□□□□□ -1.91
Syne4Q8CII8 Gm28838-201ENSMUST00000186338 315 ntBASIC3.15□□□□□ -1.91
Syne4Q8CII8 Gm29635-201ENSMUST00000187221 315 ntBASIC3.15□□□□□ -1.91
Syne4Q8CII8 Gm29026-201ENSMUST00000187787 315 ntBASIC3.15□□□□□ -1.91
Syne4Q8CII8 Gm28797-201ENSMUST00000188543 315 ntBASIC3.15□□□□□ -1.91
Syne4Q8CII8 Gm20257-202ENSMUST00000188643 130 ntBASIC3.15□□□□□ -1.91
Syne4Q8CII8 Gm28855-201ENSMUST00000188680 315 ntBASIC3.15□□□□□ -1.91
Syne4Q8CII8 Gm28705-201ENSMUST00000189548 315 ntBASIC3.15□□□□□ -1.91
Syne4Q8CII8 Gm28939-201ENSMUST00000190351 315 ntBASIC3.15□□□□□ -1.91
Syne4Q8CII8 Gm28223-201ENSMUST00000190469 315 ntBASIC3.15□□□□□ -1.91
Syne4Q8CII8 Gm29092-201ENSMUST00000190768 315 ntBASIC3.15□□□□□ -1.91
Syne4Q8CII8 Igkv4-65-201ENSMUST00000196986 358 ntBASIC3.15□□□□□ -1.91
Syne4Q8CII8 Gm44794-201ENSMUST00000206550 411 ntBASIC3.15□□□□□ -1.91
Syne4Q8CII8 Olfr1202-203ENSMUST00000217059 1153 ntAPPRIS P1 TSL 3 BASIC3.15□□□□□ -1.91
Syne4Q8CII8 CT025619.4-201ENSMUST00000217362 350 ntTSL 2 BASIC3.15□□□□□ -1.91
Syne4Q8CII8 Gm19563-201ENSMUST00000222031 270 ntBASIC3.15□□□□□ -1.91
Syne4Q8CII8 AC160550.3-201ENSMUST00000226818 400 ntBASIC3.15□□□□□ -1.91
Syne4Q8CII8 mt-Td-201ENSMUST00000082404 70 ntBASIC3.15□□□□□ -1.91
Syne4Q8CII8 Gm24764-201ENSMUST00000083686 199 ntBASIC3.15□□□□□ -1.91
Syne4Q8CII8 Olfr1316-201ENSMUST00000099596 945 ntAPPRIS P2 BASIC3.15□□□□□ -1.91
Syne4Q8CII8 Olfr606-203ENSMUST00000217250 2313 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.91
Syne4Q8CII8 Gm43268-201ENSMUST00000201536 4055 ntBASIC3.15□□□□□ -1.91
Syne4Q8CII8 Olfr640-202ENSMUST00000218535 4009 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.91
Syne4Q8CII8 CT030170.3-201ENSMUST00000221205 1815 ntBASIC3.14□□□□□ -1.91
Syne4Q8CII8 Ccdc18-201ENSMUST00000047677 5336 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
Syne4Q8CII8 Gm26102-201ENSMUST00000157251 284 ntBASIC3.14□□□□□ -1.91
Syne4Q8CII8 Gm24056-201ENSMUST00000158617 146 ntBASIC3.14□□□□□ -1.91
Syne4Q8CII8 Snord93-201ENSMUST00000175580 71 ntBASIC3.14□□□□□ -1.91
Syne4Q8CII8 Gm44476-201ENSMUST00000196225 91 ntBASIC3.14□□□□□ -1.91
Syne4Q8CII8 Gm45687-201ENSMUST00000209454 155 ntBASIC3.14□□□□□ -1.91
Syne4Q8CII8 AC130829.3-201ENSMUST00000222735 154 ntBASIC3.14□□□□□ -1.91
Syne4Q8CII8 LOC667541-201ENSMUST00000223408 278 ntBASIC3.14□□□□□ -1.91
Syne4Q8CII8 AC123533.1-201ENSMUST00000227782 446 ntBASIC3.14□□□□□ -1.91
Syne4Q8CII8 Gm37296-201ENSMUST00000192728 2922 ntBASIC3.14□□□□□ -1.91
Syne4Q8CII8 Tex16-201ENSMUST00000038546 3972 ntAPPRIS P2 TSL 1 (best) BASIC3.13□□□□□ -1.91
Syne4Q8CII8 Acsm3-201ENSMUST00000063770 2651 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
Syne4Q8CII8 Gm23142-201ENSMUST00000101848 105 ntBASIC3.13□□□□□ -1.91
Retrieved 100 of 76,532 protein–RNA pairs in 148.6 ms