Protein–RNA interactions for Protein: Q3U827

Rnf180, E3 ubiquitin-protein ligase RNF180, mousemouse

Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf180Q3U827 Skint4-202ENSMUST00000106564 3997 ntAPPRIS ALT2 TSL 1 (best) BASIC3.76□□□□□ -1.81
Rnf180Q3U827 Skint4-204ENSMUST00000106566 3997 ntAPPRIS P3 TSL 1 (best) BASIC3.76□□□□□ -1.81
Rnf180Q3U827 Obscn-201ENSMUST00000020732 23483 ntTSL 5 BASIC3.75□□□□□ -1.81
Rnf180Q3U827 Vmn2r37-201ENSMUST00000072787 3081 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
Rnf180Q3U827 Gm14327-202ENSMUST00000108935 1451 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
Rnf180Q3U827 Gm25728-201ENSMUST00000104525 159 ntBASIC3.75□□□□□ -1.81
Rnf180Q3U827 Gm23911-201ENSMUST00000104596 134 ntBASIC3.75□□□□□ -1.81
Rnf180Q3U827 Gm13439-201ENSMUST00000117541 409 ntBASIC3.75□□□□□ -1.81
Rnf180Q3U827 Gm14792-201ENSMUST00000119725 258 ntBASIC3.75□□□□□ -1.81
Rnf180Q3U827 Snhg14-203ENSMUST00000185815 670 ntTSL 5 BASIC3.75□□□□□ -1.81
Rnf180Q3U827 Gm29602-201ENSMUST00000186887 442 ntBASIC3.75□□□□□ -1.81
Rnf180Q3U827 Scgb2b29-ps-201ENSMUST00000187539 331 ntBASIC3.75□□□□□ -1.81
Rnf180Q3U827 Trav5d-2-201ENSMUST00000196107 275 ntBASIC3.75□□□□□ -1.81
Rnf180Q3U827 Trav5n-2-201ENSMUST00000197136 275 ntBASIC3.75□□□□□ -1.81
Rnf180Q3U827 Gm44073-201ENSMUST00000204173 429 ntTSL 3 BASIC3.75□□□□□ -1.81
Rnf180Q3U827 Gm45031-201ENSMUST00000206800 288 ntBASIC3.75□□□□□ -1.81
Rnf180Q3U827 Calml4-204ENSMUST00000214633 394 ntTSL 3 BASIC3.75□□□□□ -1.81
Rnf180Q3U827 Olfr772-202ENSMUST00000214672 2955 ntAPPRIS P1 TSL 5 BASIC3.75□□□□□ -1.81
Rnf180Q3U827 AC241593.1-201ENSMUST00000224768 397 ntBASIC3.75□□□□□ -1.81
Rnf180Q3U827 Zfp706-205ENSMUST00000228275 481 ntAPPRIS P1 BASIC3.75□□□□□ -1.81
Rnf180Q3U827 Gm5596-201ENSMUST00000207988 2421 ntBASIC3.75□□□□□ -1.81
Rnf180Q3U827 Clhc1-204ENSMUST00000208530 2062 ntAPPRIS ALT2 TSL 1 (best) BASIC3.75□□□□□ -1.81
Rnf180Q3U827 Olfr290-202ENSMUST00000214501 5196 ntAPPRIS P1 TSL 5 BASIC3.75□□□□□ -1.81
Rnf180Q3U827 Olfr290-204ENSMUST00000216367 5182 ntAPPRIS P1 TSL 5 BASIC3.75□□□□□ -1.81
Rnf180Q3U827 AC153365.1-201ENSMUST00000219016 2031 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
Rnf180Q3U827 Vmn2r35-201ENSMUST00000169683 2586 ntAPPRIS P1 TSL 5 BASIC3.74□□□□□ -1.81
Rnf180Q3U827 Vmn1r13-203ENSMUST00000227298 5203 ntAPPRIS P1 BASIC3.74□□□□□ -1.81
Rnf180Q3U827 Btla-202ENSMUST00000102802 3251 ntAPPRIS ALT2 TSL 1 (best) BASIC3.74□□□□□ -1.81
Rnf180Q3U827 Gm42993-201ENSMUST00000196856 7325 ntBASIC3.74□□□□□ -1.81
Rnf180Q3U827 Catsper4-202ENSMUST00000105878 632 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
Rnf180Q3U827 Gm15526-201ENSMUST00000112504 204 ntBASIC3.74□□□□□ -1.81
Rnf180Q3U827 Nell1os-202ENSMUST00000136672 491 ntTSL 5 BASIC3.74□□□□□ -1.81
Rnf180Q3U827 Gm22814-201ENSMUST00000157452 104 ntBASIC3.74□□□□□ -1.81
Rnf180Q3U827 Gm24005-201ENSMUST00000158459 296 ntBASIC3.74□□□□□ -1.81
Rnf180Q3U827 Gm23921-201ENSMUST00000175258 107 ntBASIC3.74□□□□□ -1.81
Rnf180Q3U827 Obox3-ps7-201ENSMUST00000176465 410 ntBASIC3.74□□□□□ -1.81
Rnf180Q3U827 Gm24487-201ENSMUST00000178017 63 ntBASIC3.74□□□□□ -1.81
Rnf180Q3U827 Gm24415-201ENSMUST00000180218 107 ntBASIC3.74□□□□□ -1.81
Rnf180Q3U827 Gm28954-201ENSMUST00000190031 437 ntTSL 5 BASIC3.74□□□□□ -1.81
Rnf180Q3U827 Gm31942-202ENSMUST00000195375 437 ntTSL 5 BASIC3.74□□□□□ -1.81
Rnf180Q3U827 Olfr1325-203ENSMUST00000216108 3535 ntAPPRIS ALT2 TSL 5 BASIC3.74□□□□□ -1.81
Rnf180Q3U827 Olfr6-204ENSMUST00000219365 951 ntAPPRIS P1 BASIC3.74□□□□□ -1.81
Rnf180Q3U827 Gm46389-201ENSMUST00000223199 392 ntBASIC3.74□□□□□ -1.81
Rnf180Q3U827 Mir28a-201ENSMUST00000083560 86 ntBASIC3.74□□□□□ -1.81
Rnf180Q3U827 Gm10242-201ENSMUST00000090064 330 ntBASIC3.74□□□□□ -1.81
Rnf180Q3U827 Sacs-203ENSMUST00000119943 14991 ntAPPRIS ALT2 TSL 5 BASIC3.74□□□□□ -1.81
Rnf180Q3U827 Gm12580-201ENSMUST00000127456 1751 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
Rnf180Q3U827 Gm21034-201ENSMUST00000207390 2608 ntBASIC3.74□□□□□ -1.81
Rnf180Q3U827 Lrrtm2-201ENSMUST00000091636 5665 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
Rnf180Q3U827 Olfr807-202ENSMUST00000213379 1866 ntAPPRIS P1 TSL 5 BASIC3.73□□□□□ -1.81
Rnf180Q3U827 Zfp934-202ENSMUST00000101547 2147 ntAPPRIS P1 TSL 5 BASIC3.73□□□□□ -1.81
Rnf180Q3U827 Ighv9-3-201ENSMUST00000103473 351 ntAPPRIS P1 BASIC3.73□□□□□ -1.81
Rnf180Q3U827 Gm23322-201ENSMUST00000104464 167 ntBASIC3.73□□□□□ -1.81
Rnf180Q3U827 Rps27-ps1-201ENSMUST00000118179 246 ntBASIC3.73□□□□□ -1.81
Rnf180Q3U827 Gm24898-201ENSMUST00000158133 106 ntBASIC3.73□□□□□ -1.81
Rnf180Q3U827 Gm25528-201ENSMUST00000180264 132 ntBASIC3.73□□□□□ -1.81
Rnf180Q3U827 Gm27747-201ENSMUST00000184707 85 ntBASIC3.73□□□□□ -1.81
Rnf180Q3U827 Gm27694-201ENSMUST00000184740 86 ntBASIC3.73□□□□□ -1.81
Rnf180Q3U827 Gm32175-201ENSMUST00000193641 346 ntBASIC3.73□□□□□ -1.81
Rnf180Q3U827 Gm7871-201ENSMUST00000195346 618 ntBASIC3.73□□□□□ -1.81
Rnf180Q3U827 Gm42439-201ENSMUST00000195931 486 ntTSL 3 BASIC3.73□□□□□ -1.81
Rnf180Q3U827 Igkv15-102-201ENSMUST00000197885 287 ntBASIC3.73□□□□□ -1.81
Rnf180Q3U827 Mir7682-201ENSMUST00000198467 58 ntBASIC3.73□□□□□ -1.81
Rnf180Q3U827 Gm6796-201ENSMUST00000211919 243 ntBASIC3.73□□□□□ -1.81
Rnf180Q3U827 Defb40-201ENSMUST00000066258 389 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
Rnf180Q3U827 1700019M22Rik-201ENSMUST00000073560 354 ntBASIC3.73□□□□□ -1.81
Rnf180Q3U827 Gm24042-201ENSMUST00000083114 103 ntBASIC3.73□□□□□ -1.81
Rnf180Q3U827 Olfr1450-202ENSMUST00000213587 2872 ntAPPRIS P1 TSL 5 BASIC3.73□□□□□ -1.81
Rnf180Q3U827 Gm43889-201ENSMUST00000203950 3681 ntBASIC3.73□□□□□ -1.81
Rnf180Q3U827 Olfr776-202ENSMUST00000213512 3499 ntAPPRIS P1 TSL 5 BASIC3.73□□□□□ -1.81
Rnf180Q3U827 Ntrk3-201ENSMUST00000039431 19703 ntAPPRIS P2 TSL 1 (best) BASIC3.72□□□□□ -1.81
Rnf180Q3U827 Gm37402-201ENSMUST00000194525 5000 ntBASIC3.72□□□□□ -1.81
Rnf180Q3U827 Gm26423-201ENSMUST00000104277 128 ntBASIC3.72□□□□□ -1.81
Rnf180Q3U827 Gm14020-201ENSMUST00000118165 662 ntBASIC3.72□□□□□ -1.81
Rnf180Q3U827 Gm13967-201ENSMUST00000120404 380 ntBASIC3.72□□□□□ -1.81
Rnf180Q3U827 Gm23886-201ENSMUST00000122684 313 ntBASIC3.72□□□□□ -1.81
Rnf180Q3U827 Gm24909-201ENSMUST00000157290 280 ntBASIC3.72□□□□□ -1.81
Rnf180Q3U827 Gm23257-201ENSMUST00000158322 132 ntBASIC3.72□□□□□ -1.81
Rnf180Q3U827 Gm22308-201ENSMUST00000177609 107 ntBASIC3.72□□□□□ -1.81
Rnf180Q3U827 Mir7013-201ENSMUST00000183540 72 ntBASIC3.72□□□□□ -1.81
Rnf180Q3U827 Gm29242-201ENSMUST00000186570 457 ntTSL 5 BASIC3.72□□□□□ -1.81
Rnf180Q3U827 7330423F06Rik-201ENSMUST00000197499 301 ntBASIC3.72□□□□□ -1.81
Rnf180Q3U827 Gm35386-201ENSMUST00000204603 629 ntTSL 3 BASIC3.72□□□□□ -1.81
Rnf180Q3U827 1700072O05Rik-201ENSMUST00000204672 321 ntTSL 5 BASIC3.72□□□□□ -1.81
Rnf180Q3U827 Gm44960-201ENSMUST00000207403 141 ntBASIC3.72□□□□□ -1.81
Rnf180Q3U827 AC158606.1-201ENSMUST00000220078 325 ntBASIC3.72□□□□□ -1.81
Rnf180Q3U827 Gm22997-201ENSMUST00000082845 107 ntBASIC3.72□□□□□ -1.81
Rnf180Q3U827 Zfp846-201ENSMUST00000060063 1626 ntAPPRIS P1 TSL 5 BASIC3.72□□□□□ -1.81
Rnf180Q3U827 Olfr847-202ENSMUST00000216839 2385 ntAPPRIS P1 TSL 3 BASIC3.71□□□□□ -1.81
Rnf180Q3U827 Olfr594-202ENSMUST00000214051 2809 ntAPPRIS P1 TSL 5 BASIC3.71□□□□□ -1.81
Rnf180Q3U827 Olfr898-203ENSMUST00000217063 4169 ntAPPRIS ALT2 TSL 5 BASIC3.71□□□□□ -1.81
Rnf180Q3U827 Gm24172-201ENSMUST00000104127 117 ntBASIC3.71□□□□□ -1.82
Rnf180Q3U827 Gm14843-201ENSMUST00000119596 212 ntBASIC3.71□□□□□ -1.82
Rnf180Q3U827 Gm22654-201ENSMUST00000157874 105 ntBASIC3.71□□□□□ -1.82
Rnf180Q3U827 Gm23895-201ENSMUST00000158108 160 ntBASIC3.71□□□□□ -1.82
Rnf180Q3U827 Gm25863-201ENSMUST00000158249 329 ntBASIC3.71□□□□□ -1.82
Rnf180Q3U827 Gm37162-201ENSMUST00000191708 551 ntBASIC3.71□□□□□ -1.82
Rnf180Q3U827 Gm44473-201ENSMUST00000204039 152 ntBASIC3.71□□□□□ -1.82
Rnf180Q3U827 CAAA01090905.1-201ENSMUST00000219056 426 ntTSL 2 BASIC3.71□□□□□ -1.82
Rnf180Q3U827 Spink1-201ENSMUST00000025381 422 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
Retrieved 100 of 76,532 protein–RNA pairs in 142.1 ms