Protein–RNA interactions for Protein: P55066

Ncan, Neurocan core protein, mousemouse

Predictions only

Length 1,268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NcanP55066 Gm23016-201ENSMUST00000158431 62 ntBASIC2.59□□□□□ -1.99
NcanP55066 Gm15446-203ENSMUST00000170826 192 ntTSL 5 BASIC2.59□□□□□ -1.99
NcanP55066 Gm27698-201ENSMUST00000184060 249 ntBASIC2.59□□□□□ -1.99
NcanP55066 Gm29134-201ENSMUST00000186579 126 ntBASIC2.59□□□□□ -1.99
NcanP55066 Gm7871-201ENSMUST00000195346 618 ntBASIC2.59□□□□□ -1.99
NcanP55066 AC158598.1-201ENSMUST00000214349 3847 ntBASIC2.59□□□□□ -1.99
NcanP55066 AC160031.2-201ENSMUST00000218242 274 ntBASIC2.59□□□□□ -1.99
NcanP55066 RMST_1.1-206ENSMUST00000218255 309 ntTSL 3 BASIC2.59□□□□□ -1.99
NcanP55066 AC167229.1-201ENSMUST00000220057 469 ntBASIC2.59□□□□□ -1.99
NcanP55066 Olfr835-201ENSMUST00000059315 936 ntAPPRIS P1 BASIC2.59□□□□□ -1.99
NcanP55066 Gm22577-201ENSMUST00000083731 109 ntBASIC2.59□□□□□ -1.99
NcanP55066 Olfr1454-202ENSMUST00000213806 3906 ntAPPRIS P1 TSL 5 BASIC2.59□□□□□ -1.99
NcanP55066 Vmn1r29-203ENSMUST00000227761 4671 ntAPPRIS P1 BASIC2.59□□□□□ -2
NcanP55066 Vmn1r29-205ENSMUST00000228909 4658 ntAPPRIS P1 BASIC2.59□□□□□ -2
NcanP55066 Gm23109-201ENSMUST00000116867 126 ntBASIC2.58□□□□□ -2
NcanP55066 Gm12779-201ENSMUST00000121496 143 ntBASIC2.58□□□□□ -2
NcanP55066 Rab7b-203ENSMUST00000129905 476 ntTSL 2 BASIC2.58□□□□□ -2
NcanP55066 Gm25976-201ENSMUST00000158695 130 ntBASIC2.58□□□□□ -2
NcanP55066 Gm16306-201ENSMUST00000160568 176 ntTSL 3 BASIC2.58□□□□□ -2
NcanP55066 Lce6a-202ENSMUST00000170676 485 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
NcanP55066 Gm26871-203ENSMUST00000181060 355 ntTSL 1 (best) BASIC2.58□□□□□ -2
NcanP55066 Gm29553-201ENSMUST00000189692 279 ntBASIC2.58□□□□□ -2
NcanP55066 Gm28271-201ENSMUST00000191369 351 ntTSL 3 BASIC2.58□□□□□ -2
NcanP55066 Gm33354-201ENSMUST00000195448 906 ntBASIC2.58□□□□□ -2
NcanP55066 Gm19202-201ENSMUST00000198096 808 ntBASIC2.58□□□□□ -2
NcanP55066 Gtpbp4-ps6-201ENSMUST00000198160 292 ntBASIC2.58□□□□□ -2
NcanP55066 Olfr546-ps1-201ENSMUST00000210328 326 ntBASIC2.58□□□□□ -2
NcanP55066 Gm45678-201ENSMUST00000210509 295 ntBASIC2.58□□□□□ -2
NcanP55066 AC155715.1-201ENSMUST00000213575 463 ntBASIC2.58□□□□□ -2
NcanP55066 AC125020.2-201ENSMUST00000218894 348 ntBASIC2.58□□□□□ -2
NcanP55066 AC122393.3-201ENSMUST00000226343 1059 ntBASIC2.58□□□□□ -2
NcanP55066 AC123533.1-201ENSMUST00000227782 446 ntBASIC2.58□□□□□ -2
NcanP55066 Olfr822-201ENSMUST00000080460 942 ntAPPRIS P1 BASIC2.58□□□□□ -2
NcanP55066 Gm25202-201ENSMUST00000082838 191 ntBASIC2.58□□□□□ -2
NcanP55066 Gm24037-201ENSMUST00000082871 180 ntBASIC2.58□□□□□ -2
NcanP55066 Zfp960-201ENSMUST00000127027 2667 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
NcanP55066 Olfr1256-203ENSMUST00000213833 6081 ntAPPRIS P1 TSL 3 BASIC2.58□□□□□ -2
NcanP55066 Olfr218-203ENSMUST00000216603 3623 ntAPPRIS P1 TSL 5 BASIC2.57□□□□□ -2
NcanP55066 Gm43326-201ENSMUST00000198459 1638 ntBASIC2.57□□□□□ -2
NcanP55066 Gm45652-201ENSMUST00000210926 3831 ntBASIC2.57□□□□□ -2
NcanP55066 Gm45104-201ENSMUST00000208748 4350 ntBASIC2.57□□□□□ -2
NcanP55066 Igkv2-109-201ENSMUST00000103322 374 ntAPPRIS P1 BASIC2.57□□□□□ -2
NcanP55066 Gm25090-201ENSMUST00000104000 132 ntBASIC2.57□□□□□ -2
NcanP55066 Dppa1-202ENSMUST00000109227 551 ntAPPRIS P1 TSL 2 BASIC2.57□□□□□ -2
NcanP55066 Gm14574-201ENSMUST00000120644 279 ntBASIC2.57□□□□□ -2
NcanP55066 Gm11556-201ENSMUST00000120751 288 ntBASIC2.57□□□□□ -2
NcanP55066 Gm14069-201ENSMUST00000120815 229 ntBASIC2.57□□□□□ -2
NcanP55066 Gm12872-201ENSMUST00000121835 320 ntBASIC2.57□□□□□ -2
NcanP55066 Cdrt4os2-201ENSMUST00000128675 494 ntTSL 2 BASIC2.57□□□□□ -2
NcanP55066 Gm25970-201ENSMUST00000157165 86 ntBASIC2.57□□□□□ -2
NcanP55066 Gm23956-201ENSMUST00000157211 119 ntBASIC2.57□□□□□ -2
NcanP55066 Gm25909-201ENSMUST00000157619 121 ntBASIC2.57□□□□□ -2
NcanP55066 Gm24853-201ENSMUST00000158026 121 ntBASIC2.57□□□□□ -2
NcanP55066 Gm22839-201ENSMUST00000158436 304 ntBASIC2.57□□□□□ -2
NcanP55066 Gm5168-202ENSMUST00000168002 636 ntAPPRIS P1 TSL 5 BASIC2.57□□□□□ -2
NcanP55066 Gm20484-201ENSMUST00000173738 231 ntTSL 2 BASIC2.57□□□□□ -2
NcanP55066 Snord53-201ENSMUST00000175146 78 ntBASIC2.57□□□□□ -2
NcanP55066 Trav7d-4-201ENSMUST00000178768 451 ntAPPRIS P1 BASIC2.57□□□□□ -2
NcanP55066 Trav7-4-201ENSMUST00000181728 451 ntAPPRIS P1 BASIC2.57□□□□□ -2
NcanP55066 Mir8103-201ENSMUST00000183945 107 ntBASIC2.57□□□□□ -2
NcanP55066 Mir6394-201ENSMUST00000184738 99 ntBASIC2.57□□□□□ -2
NcanP55066 Gm34599-201ENSMUST00000198924 288 ntTSL 3 BASIC2.57□□□□□ -2
NcanP55066 Mir691-201ENSMUST00000199719 78 ntBASIC2.57□□□□□ -2
NcanP55066 Gm44149-201ENSMUST00000204256 226 ntBASIC2.57□□□□□ -2
NcanP55066 Gm44938-201ENSMUST00000208614 427 ntBASIC2.57□□□□□ -2
NcanP55066 Olfr499-ps1-201ENSMUST00000208811 930 ntBASIC2.57□□□□□ -2
NcanP55066 AC100590.3-201ENSMUST00000219355 332 ntTSL 5 BASIC2.57□□□□□ -2
NcanP55066 Gm7240-201ENSMUST00000220769 664 ntBASIC2.57□□□□□ -2
NcanP55066 Vmn1r230-201ENSMUST00000053974 951 ntAPPRIS P1 BASIC2.57□□□□□ -2
NcanP55066 Ear2-201ENSMUST00000074839 719 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
NcanP55066 Gm23042-201ENSMUST00000083866 101 ntBASIC2.57□□□□□ -2
NcanP55066 Gm3867-201ENSMUST00000086108 279 ntBASIC2.57□□□□□ -2
NcanP55066 Atp11c-205ENSMUST00000154051 6039 ntTSL 5 BASIC2.57□□□□□ -2
NcanP55066 Gm45844-205ENSMUST00000210333 3861 ntAPPRIS P5 TSL 1 (best) BASIC2.57□□□□□ -2
NcanP55066 Vmn2r-ps83-201ENSMUST00000173787 2368 ntBASIC2.57□□□□□ -2
NcanP55066 Gm43379-201ENSMUST00000196253 7726 ntBASIC2.56□□□□□ -2
NcanP55066 Olfr1218-203ENSMUST00000215048 3900 ntAPPRIS P1 TSL 5 BASIC2.56□□□□□ -2
NcanP55066 Gm19428-201ENSMUST00000220512 1995 ntBASIC2.56□□□□□ -2
NcanP55066 Muc16-204ENSMUST00000208663 25437 ntAPPRIS P1 TSL 5 BASIC2.56□□□□□ -2
NcanP55066 Gm11819-201ENSMUST00000122192 372 ntBASIC2.56□□□□□ -2
NcanP55066 Gm23752-201ENSMUST00000157584 115 ntBASIC2.56□□□□□ -2
NcanP55066 Gm24419-201ENSMUST00000157875 332 ntBASIC2.56□□□□□ -2
NcanP55066 Gm23411-201ENSMUST00000157988 62 ntBASIC2.56□□□□□ -2
NcanP55066 Gm24810-201ENSMUST00000175317 70 ntBASIC2.56□□□□□ -2
NcanP55066 Mir3968-201ENSMUST00000175355 100 ntBASIC2.56□□□□□ -2
NcanP55066 Gm3852-201ENSMUST00000182781 264 ntBASIC2.56□□□□□ -2
NcanP55066 Ranbp2-ps2-201ENSMUST00000184379 370 ntBASIC2.56□□□□□ -2
NcanP55066 Gm29350-201ENSMUST00000189141 541 ntBASIC2.56□□□□□ -2
NcanP55066 Gm44476-201ENSMUST00000196225 91 ntBASIC2.56□□□□□ -2
NcanP55066 Igkv1-136-201ENSMUST00000200635 297 ntBASIC2.56□□□□□ -2
NcanP55066 Gm43911-201ENSMUST00000203097 76 ntBASIC2.56□□□□□ -2
NcanP55066 Gm44336-201ENSMUST00000203696 468 ntBASIC2.56□□□□□ -2
NcanP55066 4930431P19Rik-201ENSMUST00000207570 451 ntBASIC2.56□□□□□ -2
NcanP55066 Gm45673-201ENSMUST00000210293 358 ntBASIC2.56□□□□□ -2
NcanP55066 Gm45741-201ENSMUST00000212661 152 ntTSL 1 (best) BASIC2.56□□□□□ -2
NcanP55066 AC154296.2-201ENSMUST00000214696 545 ntBASIC2.56□□□□□ -2
NcanP55066 AC192333.1-201ENSMUST00000224573 376 ntBASIC2.56□□□□□ -2
NcanP55066 Gm22364-201ENSMUST00000083097 98 ntBASIC2.56□□□□□ -2
NcanP55066 Olfr1052-203ENSMUST00000217166 1694 ntAPPRIS P1 TSL 5 BASIC2.56□□□□□ -2
NcanP55066 Zfp273-201ENSMUST00000012725 2277 ntTSL 1 (best) BASIC2.56□□□□□ -2
Retrieved 100 of 76,532 protein–RNA pairs in 161.5 ms