Protein–RNA interactions for Protein: P18828

Sdc1, Syndecan-1, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc1P18828 Vmn2r-ps34-201ENSMUST00000177433 904 ntBASIC1.52□□□□□ -2.17
Sdc1P18828 Gm28449-201ENSMUST00000187655 506 ntTSL 3 BASIC1.52□□□□□ -2.17
Sdc1P18828 Gm28404-201ENSMUST00000190242 453 ntBASIC1.52□□□□□ -2.17
Sdc1P18828 Gm37353-201ENSMUST00000194497 313 ntBASIC1.52□□□□□ -2.17
Sdc1P18828 Ranbp2-ps11-201ENSMUST00000197185 387 ntBASIC1.52□□□□□ -2.17
Sdc1P18828 Gm42960-201ENSMUST00000202160 241 ntBASIC1.52□□□□□ -2.17
Sdc1P18828 Gm20083-201ENSMUST00000205849 751 ntTSL 3 BASIC1.52□□□□□ -2.17
Sdc1P18828 Gm45754-201ENSMUST00000212380 279 ntBASIC1.52□□□□□ -2.17
Sdc1P18828 AC116465.1-201ENSMUST00000220324 235 ntBASIC1.52□□□□□ -2.17
Sdc1P18828 Gm39473-201ENSMUST00000223498 522 ntTSL 3 BASIC1.52□□□□□ -2.17
Sdc1P18828 AC167140.1-201ENSMUST00000224710 403 ntBASIC1.52□□□□□ -2.17
Sdc1P18828 Mir193a-201ENSMUST00000083461 66 ntBASIC1.52□□□□□ -2.17
Sdc1P18828 Gm44644-202ENSMUST00000208825 3133 ntTSL 2 BASIC1.52□□□□□ -2.17
Sdc1P18828 A630081D01Rik-201ENSMUST00000195842 1833 ntBASIC1.52□□□□□ -2.17
Sdc1P18828 Gm44114-201ENSMUST00000203270 2727 ntBASIC1.52□□□□□ -2.17
Sdc1P18828 Olfr1044-202ENSMUST00000215171 3266 ntAPPRIS P1 TSL 5 BASIC1.51□□□□□ -2.17
Sdc1P18828 n-R5s187-201ENSMUST00000122769 111 ntBASIC1.51□□□□□ -2.17
Sdc1P18828 Gm23589-201ENSMUST00000157660 105 ntBASIC1.51□□□□□ -2.17
Sdc1P18828 Gm24419-201ENSMUST00000157875 332 ntBASIC1.51□□□□□ -2.17
Sdc1P18828 Gm22731-201ENSMUST00000158086 94 ntBASIC1.51□□□□□ -2.17
Sdc1P18828 Gm22159-201ENSMUST00000158412 130 ntBASIC1.51□□□□□ -2.17
Sdc1P18828 Gm16162-201ENSMUST00000162296 297 ntBASIC1.51□□□□□ -2.17
Sdc1P18828 Mir3075-201ENSMUST00000175340 85 ntBASIC1.51□□□□□ -2.17
Sdc1P18828 Snord87-201ENSMUST00000175437 87 ntBASIC1.51□□□□□ -2.17
Sdc1P18828 Gm20660-201ENSMUST00000177515 289 ntBASIC1.51□□□□□ -2.17
Sdc1P18828 Gm22631-201ENSMUST00000179656 94 ntBASIC1.51□□□□□ -2.17
Sdc1P18828 Vmn2r-ps19-201ENSMUST00000179720 269 ntBASIC1.51□□□□□ -2.17
Sdc1P18828 Mir6925-201ENSMUST00000197857 70 ntBASIC1.51□□□□□ -2.17
Sdc1P18828 Gm43739-201ENSMUST00000198294 307 ntBASIC1.51□□□□□ -2.17
Sdc1P18828 Olfr838-ps1-201ENSMUST00000211872 977 ntBASIC1.51□□□□□ -2.17
Sdc1P18828 AC153968.2-201ENSMUST00000215579 1140 ntBASIC1.51□□□□□ -2.17
Sdc1P18828 AC124346.1-201ENSMUST00000218539 364 ntBASIC1.51□□□□□ -2.17
Sdc1P18828 AC154552.7-201ENSMUST00000222824 156 ntBASIC1.51□□□□□ -2.17
Sdc1P18828 Gm22299-201ENSMUST00000082663 136 ntBASIC1.51□□□□□ -2.17
Sdc1P18828 Gm25475-201ENSMUST00000082825 180 ntBASIC1.51□□□□□ -2.17
Sdc1P18828 Klra3-201ENSMUST00000088017 984 ntAPPRIS P1 TSL 1 (best) BASIC1.51□□□□□ -2.17
Sdc1P18828 Mir873a-201ENSMUST00000104863 77 ntBASIC1.5□□□□□ -2.17
Sdc1P18828 Gm14674-201ENSMUST00000117816 342 ntBASIC1.5□□□□□ -2.17
Sdc1P18828 Gm5396-201ENSMUST00000121222 532 ntBASIC1.5□□□□□ -2.17
Sdc1P18828 Gm25808-201ENSMUST00000122784 284 ntBASIC1.5□□□□□ -2.17
Sdc1P18828 Gm14100-201ENSMUST00000125575 651 ntTSL 3 BASIC1.5□□□□□ -2.17
Sdc1P18828 Gm24480-201ENSMUST00000157442 103 ntBASIC1.5□□□□□ -2.17
Sdc1P18828 Lce6a-202ENSMUST00000170676 485 ntAPPRIS P1 TSL 1 (best) BASIC1.5□□□□□ -2.17
Sdc1P18828 Gm24572-201ENSMUST00000175505 88 ntBASIC1.5□□□□□ -2.17
Sdc1P18828 Gm27660-201ENSMUST00000184028 208 ntBASIC1.5□□□□□ -2.17
Sdc1P18828 Gm29347-201ENSMUST00000186695 449 ntTSL 3 BASIC1.5□□□□□ -2.17
Sdc1P18828 1700031L13Rik-204ENSMUST00000188072 812 ntTSL 5 BASIC1.5□□□□□ -2.17
Sdc1P18828 Gm18357-201ENSMUST00000188184 580 ntBASIC1.5□□□□□ -2.17
Sdc1P18828 Gm28926-201ENSMUST00000191063 680 ntBASIC1.5□□□□□ -2.17
Sdc1P18828 Mir691-201ENSMUST00000199719 78 ntBASIC1.5□□□□□ -2.17
Sdc1P18828 Gm43914-201ENSMUST00000203592 594 ntBASIC1.5□□□□□ -2.17
Sdc1P18828 Gm18854-201ENSMUST00000211196 329 ntBASIC1.5□□□□□ -2.17
Sdc1P18828 Gm24805-201ENSMUST00000082931 104 ntBASIC1.5□□□□□ -2.17
Sdc1P18828 Gm23453-201ENSMUST00000083326 106 ntBASIC1.5□□□□□ -2.17
Sdc1P18828 Gm34240-201ENSMUST00000192500 1936 ntTSL 1 (best) BASIC1.5□□□□□ -2.17
Sdc1P18828 Olfr1208-202ENSMUST00000214121 2823 ntAPPRIS P1 TSL 3 BASIC1.49□□□□□ -2.17
Sdc1P18828 AC124426.1-203ENSMUST00000221814 1362 ntBASIC1.49□□□□□ -2.17
Sdc1P18828 Clec1b-202ENSMUST00000112079 455 ntTSL 1 (best) BASIC1.49□□□□□ -2.17
Sdc1P18828 Gm14678-201ENSMUST00000121396 482 ntBASIC1.49□□□□□ -2.17
Sdc1P18828 Gm22768-201ENSMUST00000158366 153 ntBASIC1.49□□□□□ -2.17
Sdc1P18828 Gm24922-201ENSMUST00000158511 102 ntBASIC1.49□□□□□ -2.17
Sdc1P18828 H3f3aos-202ENSMUST00000159740 229 ntTSL 5 BASIC1.49□□□□□ -2.17
Sdc1P18828 1700129C05Rik-203ENSMUST00000162271 325 ntAPPRIS ALT2 TSL 3 BASIC1.49□□□□□ -2.17
Sdc1P18828 Mir3076-201ENSMUST00000175415 60 ntBASIC1.49□□□□□ -2.17
Sdc1P18828 Ighv1-28-201ENSMUST00000192987 351 ntBASIC1.49□□□□□ -2.17
Sdc1P18828 Mir3961-201ENSMUST00000198795 59 ntBASIC1.49□□□□□ -2.17
Sdc1P18828 AC134334.1-201ENSMUST00000214277 255 ntBASIC1.49□□□□□ -2.17
Sdc1P18828 AC123533.1-201ENSMUST00000227782 446 ntBASIC1.49□□□□□ -2.17
Sdc1P18828 Mir429-201ENSMUST00000083493 83 ntBASIC1.49□□□□□ -2.17
Sdc1P18828 Olfr791-202ENSMUST00000217228 2502 ntAPPRIS P1 TSL 5 BASIC1.49□□□□□ -2.17
Sdc1P18828 Igkv17-121-201ENSMUST00000103315 350 ntAPPRIS ALT2 BASIC1.48□□□□□ -2.17
Sdc1P18828 Gm25269-201ENSMUST00000122601 104 ntBASIC1.48□□□□□ -2.17
Sdc1P18828 Oosp2-202ENSMUST00000135994 453 ntAPPRIS ALT2 TSL 3 BASIC1.48□□□□□ -2.17
Sdc1P18828 Gm13942-201ENSMUST00000136950 325 ntTSL 3 BASIC1.48□□□□□ -2.17
Sdc1P18828 Gm24478-201ENSMUST00000157439 158 ntBASIC1.48□□□□□ -2.17
Sdc1P18828 Gm26345-201ENSMUST00000157534 120 ntBASIC1.48□□□□□ -2.17
Sdc1P18828 Gm16043-201ENSMUST00000160030 616 ntTSL 3 BASIC1.48□□□□□ -2.17
Sdc1P18828 Gm24315-201ENSMUST00000177835 127 ntBASIC1.48□□□□□ -2.17
Sdc1P18828 Mir6916-201ENSMUST00000184514 63 ntBASIC1.48□□□□□ -2.17
Sdc1P18828 Mir6993-201ENSMUST00000184912 65 ntBASIC1.48□□□□□ -2.17
Sdc1P18828 Gm28900-201ENSMUST00000185232 156 ntBASIC1.48□□□□□ -2.17
Sdc1P18828 Gm29657-201ENSMUST00000189807 342 ntBASIC1.48□□□□□ -2.17
Sdc1P18828 Gm8747-201ENSMUST00000195392 751 ntBASIC1.48□□□□□ -2.17
Sdc1P18828 Gm45375-201ENSMUST00000210338 280 ntBASIC1.48□□□□□ -2.17
Sdc1P18828 Gm6796-201ENSMUST00000211919 243 ntBASIC1.48□□□□□ -2.17
Sdc1P18828 Gm35101-201ENSMUST00000219218 243 ntTSL 5 BASIC1.48□□□□□ -2.17
Sdc1P18828 Gm35558-203ENSMUST00000222264 204 ntBASIC1.48□□□□□ -2.17
Sdc1P18828 AC132918.1-201ENSMUST00000227877 925 ntBASIC1.48□□□□□ -2.17
Sdc1P18828 Clec4a4-201ENSMUST00000079379 776 ntAPPRIS P1 TSL 1 (best) BASIC1.48□□□□□ -2.17
Sdc1P18828 Gm25589-201ENSMUST00000082502 166 ntBASIC1.48□□□□□ -2.17
Sdc1P18828 Defb41-201ENSMUST00000088463 467 ntTSL 1 (best) BASIC1.48□□□□□ -2.17
Sdc1P18828 Zfp119a-201ENSMUST00000079642 2018 ntAPPRIS P1 TSL 1 (best) BASIC1.47□□□□□ -2.17
Sdc1P18828 Gm24098-201ENSMUST00000102075 109 ntBASIC1.47□□□□□ -2.17
Sdc1P18828 Gm25381-201ENSMUST00000102078 109 ntBASIC1.47□□□□□ -2.17
Sdc1P18828 Gm25407-201ENSMUST00000104102 134 ntBASIC1.47□□□□□ -2.17
Sdc1P18828 Gm11407-201ENSMUST00000120362 1058 ntBASIC1.47□□□□□ -2.17
Sdc1P18828 Gm24896-201ENSMUST00000122741 135 ntBASIC1.47□□□□□ -2.17
Sdc1P18828 Gm25059-201ENSMUST00000157367 117 ntBASIC1.47□□□□□ -2.17
Sdc1P18828 Gm24222-201ENSMUST00000158834 93 ntBASIC1.47□□□□□ -2.17
Sdc1P18828 Gm24816-201ENSMUST00000175311 151 ntBASIC1.47□□□□□ -2.17
Retrieved 100 of 76,532 protein–RNA pairs in 93.7 ms