Protein–RNA interactions for Protein: Q07563

Col17a1, Collagen alpha-1(XVII) chain, mousemouse

Predictions only

Length 1,470 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col17a1Q07563 Olfr1202-202ENSMUST00000214703 3665 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.71
Col17a1Q07563 Zfp280c-204ENSMUST00000114940 3863 ntAPPRIS ALT2 TSL 1 (best) BASIC4.4□□□□□ -1.71
Col17a1Q07563 Syne1-205ENSMUST00000215295 27908 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.71
Col17a1Q07563 Gm43834-201ENSMUST00000197097 4830 ntBASIC4.39□□□□□ -1.71
Col17a1Q07563 Gm24867-201ENSMUST00000104161 107 ntBASIC4.39□□□□□ -1.71
Col17a1Q07563 Gm14823-201ENSMUST00000117698 238 ntBASIC4.39□□□□□ -1.71
Col17a1Q07563 Gm13903-201ENSMUST00000120945 193 ntBASIC4.39□□□□□ -1.71
Col17a1Q07563 Gm24577-201ENSMUST00000158580 63 ntBASIC4.39□□□□□ -1.71
Col17a1Q07563 Gm25051-201ENSMUST00000158602 249 ntBASIC4.39□□□□□ -1.71
Col17a1Q07563 Vmn1r-ps40-201ENSMUST00000172862 343 ntBASIC4.39□□□□□ -1.71
Col17a1Q07563 Gm25235-201ENSMUST00000179933 107 ntBASIC4.39□□□□□ -1.71
Col17a1Q07563 Gm19193-201ENSMUST00000190263 590 ntBASIC4.39□□□□□ -1.71
Col17a1Q07563 Igkv4-65-201ENSMUST00000196986 358 ntBASIC4.39□□□□□ -1.71
Col17a1Q07563 Gm45119-201ENSMUST00000207612 199 ntBASIC4.39□□□□□ -1.71
Col17a1Q07563 AC154994.1-201ENSMUST00000217395 302 ntBASIC4.39□□□□□ -1.71
Col17a1Q07563 CT009718.4-201ENSMUST00000221881 109 ntBASIC4.39□□□□□ -1.71
Col17a1Q07563 AC140477.1-201ENSMUST00000222354 246 ntBASIC4.39□□□□□ -1.71
Col17a1Q07563 Gm26497-201ENSMUST00000083146 107 ntBASIC4.39□□□□□ -1.71
Col17a1Q07563 Gm15319-201ENSMUST00000084046 2522 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
Col17a1Q07563 Gm23063-201ENSMUST00000102350 93 ntBASIC4.38□□□□□ -1.71
Col17a1Q07563 Gm12785-201ENSMUST00000122052 172 ntBASIC4.38□□□□□ -1.71
Col17a1Q07563 Gm14768-201ENSMUST00000122126 678 ntBASIC4.38□□□□□ -1.71
Col17a1Q07563 Gm23892-201ENSMUST00000158105 130 ntBASIC4.38□□□□□ -1.71
Col17a1Q07563 Gm25223-201ENSMUST00000158200 110 ntBASIC4.38□□□□□ -1.71
Col17a1Q07563 Gm23702-201ENSMUST00000158840 130 ntBASIC4.38□□□□□ -1.71
Col17a1Q07563 Gm38356-201ENSMUST00000194313 408 ntBASIC4.38□□□□□ -1.71
Col17a1Q07563 Gm38060-201ENSMUST00000194822 464 ntBASIC4.38□□□□□ -1.71
Col17a1Q07563 Gm43975-201ENSMUST00000203023 481 ntBASIC4.38□□□□□ -1.71
Col17a1Q07563 Gm19761-201ENSMUST00000205372 391 ntBASIC4.38□□□□□ -1.71
Col17a1Q07563 Gm45092-201ENSMUST00000205944 545 ntTSL 3 BASIC4.38□□□□□ -1.71
Col17a1Q07563 AC159380.1-201ENSMUST00000218096 121 ntBASIC4.38□□□□□ -1.71
Col17a1Q07563 AC153568.1-201ENSMUST00000218165 341 ntTSL 2 BASIC4.38□□□□□ -1.71
Col17a1Q07563 Gm25204-201ENSMUST00000082843 106 ntBASIC4.38□□□□□ -1.71
Col17a1Q07563 Gm26263-201ENSMUST00000083281 164 ntBASIC4.38□□□□□ -1.71
Col17a1Q07563 Mir496a-201ENSMUST00000093627 79 ntBASIC4.38□□□□□ -1.71
Col17a1Q07563 Vmn2r59-201ENSMUST00000168489 2598 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
Col17a1Q07563 Nebl-202ENSMUST00000124270 8079 ntTSL 5 BASIC4.38□□□□□ -1.71
Col17a1Q07563 n-R5s67-201ENSMUST00000104336 114 ntBASIC4.37□□□□□ -1.71
Col17a1Q07563 Gm16017-201ENSMUST00000119834 208 ntBASIC4.37□□□□□ -1.71
Col17a1Q07563 Gm15112-201ENSMUST00000120152 860 ntBASIC4.37□□□□□ -1.71
Col17a1Q07563 Gm14271-201ENSMUST00000137886 630 ntTSL 3 BASIC4.37□□□□□ -1.71
Col17a1Q07563 Gm11337-201ENSMUST00000144770 335 ntTSL 2 BASIC4.37□□□□□ -1.71
Col17a1Q07563 Vmn1r-ps83-201ENSMUST00000172677 705 ntBASIC4.37□□□□□ -1.71
Col17a1Q07563 Mir3964-201ENSMUST00000174898 74 ntBASIC4.37□□□□□ -1.71
Col17a1Q07563 Gm24518-201ENSMUST00000180275 94 ntBASIC4.37□□□□□ -1.71
Col17a1Q07563 Gm7329-201ENSMUST00000185915 210 ntBASIC4.37□□□□□ -1.71
Col17a1Q07563 Gm43236-201ENSMUST00000197414 313 ntTSL 5 BASIC4.37□□□□□ -1.71
Col17a1Q07563 Gm43749-201ENSMUST00000199345 352 ntBASIC4.37□□□□□ -1.71
Col17a1Q07563 Olfr1481-ps1-201ENSMUST00000207312 134 ntBASIC4.37□□□□□ -1.71
Col17a1Q07563 Gm18453-201ENSMUST00000208000 626 ntBASIC4.37□□□□□ -1.71
Col17a1Q07563 AC157570.3-201ENSMUST00000219281 205 ntBASIC4.37□□□□□ -1.71
Col17a1Q07563 AC124104.1-201ENSMUST00000226279 417 ntBASIC4.37□□□□□ -1.71
Col17a1Q07563 n-R5s220-201ENSMUST00000082926 120 ntBASIC4.37□□□□□ -1.71
Col17a1Q07563 Vmn1r74-202ENSMUST00000228471 6608 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
Col17a1Q07563 C87977-201ENSMUST00000105753 2446 ntAPPRIS ALT2 TSL 1 (best) BASIC4.37□□□□□ -1.71
Col17a1Q07563 Olfr887-202ENSMUST00000212502 6281 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
Col17a1Q07563 Gm23705-201ENSMUST00000104370 130 ntBASIC4.37□□□□□ -1.71
Col17a1Q07563 Gm15807-201ENSMUST00000119880 1128 ntBASIC4.37□□□□□ -1.71
Col17a1Q07563 Gm22435-201ENSMUST00000158552 128 ntBASIC4.37□□□□□ -1.71
Col17a1Q07563 Mir6336-201ENSMUST00000183581 130 ntBASIC4.37□□□□□ -1.71
Col17a1Q07563 Gm27991-201ENSMUST00000184804 137 ntBASIC4.37□□□□□ -1.71
Col17a1Q07563 Gm38332-201ENSMUST00000194189 147 ntBASIC4.37□□□□□ -1.71
Col17a1Q07563 AL928567.1-201ENSMUST00000197891 138 ntBASIC4.37□□□□□ -1.71
Col17a1Q07563 Gm36406-202ENSMUST00000203761 551 ntTSL 5 BASIC4.37□□□□□ -1.71
Col17a1Q07563 Gm36546-201ENSMUST00000206372 230 ntTSL 5 BASIC4.37□□□□□ -1.71
Col17a1Q07563 AC127578.1-201ENSMUST00000227289 93 ntBASIC4.37□□□□□ -1.71
Col17a1Q07563 Olfr786-201ENSMUST00000076508 939 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
Col17a1Q07563 Gm23041-201ENSMUST00000083868 106 ntBASIC4.37□□□□□ -1.71
Col17a1Q07563 Vmn1r43-205ENSMUST00000228709 12646 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
Col17a1Q07563 Olfr1437-202ENSMUST00000207241 3751 ntAPPRIS P1 TSL 2 BASIC4.36□□□□□ -1.71
Col17a1Q07563 Gm13757-201ENSMUST00000126038 4460 ntAPPRIS P1 TSL 3 BASIC4.36□□□□□ -1.71
Col17a1Q07563 BC051076-202ENSMUST00000199477 2868 ntBASIC4.36□□□□□ -1.71
Col17a1Q07563 Vmn2r66-201ENSMUST00000124773 2556 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
Col17a1Q07563 Gm23841-201ENSMUST00000116951 114 ntBASIC4.36□□□□□ -1.71
Col17a1Q07563 Gm14669-201ENSMUST00000118841 250 ntBASIC4.36□□□□□ -1.71
Col17a1Q07563 Gm6374-201ENSMUST00000159051 788 ntBASIC4.36□□□□□ -1.71
Col17a1Q07563 Gm27997-201ENSMUST00000184942 69 ntBASIC4.36□□□□□ -1.71
Col17a1Q07563 Gm38255-201ENSMUST00000194910 2996 ntBASIC4.36□□□□□ -1.71
Col17a1Q07563 Gm44977-201ENSMUST00000205283 420 ntBASIC4.36□□□□□ -1.71
Col17a1Q07563 Gm45772-201ENSMUST00000212961 240 ntBASIC4.36□□□□□ -1.71
Col17a1Q07563 Gm23939-201ENSMUST00000082880 133 ntBASIC4.36□□□□□ -1.71
Col17a1Q07563 Gm25126-201ENSMUST00000083343 102 ntBASIC4.36□□□□□ -1.71
Col17a1Q07563 Olfr199-202ENSMUST00000214186 2728 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
Col17a1Q07563 Olfr59-201ENSMUST00000143976 3088 ntAPPRIS P1 TSL 3 BASIC4.35□□□□□ -1.71
Col17a1Q07563 Vmn1r47-202ENSMUST00000227229 6733 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
Col17a1Q07563 Vmn1r47-204ENSMUST00000228680 6717 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
Col17a1Q07563 Gm37494-202ENSMUST00000188038 16021 ntTSL 5 BASIC4.35□□□□□ -1.71
Col17a1Q07563 Gm14914-201ENSMUST00000117576 2031 ntBASIC4.35□□□□□ -1.71
Col17a1Q07563 AC153526.2-201ENSMUST00000218206 2031 ntBASIC4.35□□□□□ -1.71
Col17a1Q07563 Gm15951-201ENSMUST00000118377 400 ntBASIC4.35□□□□□ -1.71
Col17a1Q07563 Gm13967-201ENSMUST00000120404 380 ntBASIC4.35□□□□□ -1.71
Col17a1Q07563 Gm23179-201ENSMUST00000158693 304 ntBASIC4.35□□□□□ -1.71
Col17a1Q07563 Igkv13-78-1-201ENSMUST00000199298 200 ntBASIC4.35□□□□□ -1.71
Col17a1Q07563 Gm38997-201ENSMUST00000205669 304 ntTSL 5 BASIC4.35□□□□□ -1.71
Col17a1Q07563 2010005H15Rik-201ENSMUST00000063539 294 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
Col17a1Q07563 Xiap-201ENSMUST00000026978 6834 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
Col17a1Q07563 Gm37824-201ENSMUST00000193430 3236 ntBASIC4.35□□□□□ -1.71
Col17a1Q07563 Vmn2r36-201ENSMUST00000170402 2561 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.71
Col17a1Q07563 Rian-201ENSMUST00000180876 8089 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
Col17a1Q07563 Gm42585-201ENSMUST00000198731 4020 ntBASIC4.34□□□□□ -1.71
Retrieved 100 of 76,532 protein–RNA pairs in 164.8 ms